RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MTHFD1P11586 935 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 FCGR2AP12318 317 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PGDP52209 483 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 DBPQ10586 325 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 PDE7AQ13946 482 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TCTE1Q5JU00 501 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CENPUQ71F23 418 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TRPM8Q7Z2W7 1104 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CYP4Z2PQ8N1L4 340 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 KCTD4Q8WVF5 259 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FRMD8P1Q9BZ68 369 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 ZNF226Q9NYT6 803 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 MCTS1Q9ULC4 181 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 PRAMEF26H0Y7S4 382 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 AREL1O15033 823 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ALDH4A1P30038 563 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 HSD17B2P37059 387 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FCHO2Q0JRZ9 810 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 RUNX3Q13761 415 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FCRL6Q6DN72 434 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 VSIG10LQ86VR7 867 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 DNAAF1Q8NEP3 725 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SMARCD2Q92925 531 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FCRL3Q96P31 734 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 TAAR1Q96RJ0 339 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 L2HGDHQ9H9P8 463 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 POLG2Q9UHN1 485 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TP53BP1Q12888 1972 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 MIF4GDA9UHW6 222 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 PSMD11O00231 422 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SOX11P35716 441 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 KIAA1211LQ6NV74 962 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ZSWIM3Q96MP5 696 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 UBL7Q96S82 380 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 SLITRK2Q9H156 845 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 EPN3Q9H201 632 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 KIAA1468Q9P260 1216 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 AP4E1Q9UPM8 1137 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 WASF3Q9UPY6 502 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TELO2Q9Y4R8 837 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 MYO10Q9HD67 2058 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 EPHB2P29323 1055 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CUL2Q13617 745 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 RCN1Q15293 331 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 AMZ1Q400G9 498 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SPDYAQ5MJ70 313 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 UNC13DQ70J99 1090 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CRLF3Q8IUI8 442 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 RBM12Q9NTZ6 932 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 PADI3Q9ULW8 664 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TOR1BO14657 336 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 POLR1CO15160 346 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 PLA2G6O60733 806 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 LRRN2O75325 713 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 EN2P19622 333 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 RPS23P62266 143 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 NSDHLQ15738 373 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 NAA35Q5VZE5 725 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 C15orf52Q6ZUT6 534 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 CCDC116Q8IYX3 515 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 TEX9Q8N6V9 391 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 IGSF22Q8N9C0 903 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ARHGEF33A8MVX0 844 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 RNGTTO60942 597 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 CD2BP2O95400 341 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 RUNX2Q13950 521 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 DSC3Q14574 896 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 KCTD19Q17RG1 926 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 ACAD11Q709F0 780 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 Q9H521 79 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ALG13Q9NP73 1137 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 E7EQ34 232 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 H0YJX3 145 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 STMND1H3BQB6 276 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 NFIBO00712 420 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 KMOO15229 486 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SUOXP51687 545 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CLCN5P51795 746 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CHRNB3Q05901 458 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 SPEM2Q0P670 501 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 LRRC74AQ0VAA2 488 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 FAM187BQ17R55 369 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 KNOP1Q1ED39 458 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 BRMS1LQ5PSV4 323 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CACHD1Q5VU97 1274 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PSAPL1Q6NUJ1 521 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PID1Q7Z2X4 250 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PRUNE1Q86TP1 453 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ZCCHC9Q8N567 271 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 SPC24Q8NBT2 197 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ANKK1Q8NFD2 765 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CCDC126Q96EE4 140 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 CYFIP2Q96F07 1278 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 GPR174Q9BXC1 333 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 PPARGC1AQ9UBK2 798 aaKnown RBP3.37□□□□□ -1.87
LPP-220ENST00000617246 ZNF232Q9UNY5 417 aa3.37□□□□□ -1.87
LPP-220ENST00000617246 ACSL1P33121 698 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 GNPDA1P46926 289 aa3.36□□□□□ -1.87
LPP-220ENST00000617246 ZNF41P51814 821 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms