RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 LRRN4CLQ8ND94 238 aa15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 SCRN2Q96FV2 425 aa15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 HINFPQ9BQA5 517 aa15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 ERP44Q9BS26 406 aa15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 GPR174Q9BXC1 333 aa15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 B4GALT6Q9UBX8 382 aa15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 TPX2Q9ULW0 747 aaKnown RBP15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 SNX24Q9Y343 169 aa15.69■□□□□ 0.1
PCDHGC3-204ENST00000617222 A0A0U1RQS6 177 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 LRRC72A6NJI9 287 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 DNALI1O14645 258 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 HRO43593 1189 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 AP1G1O43747 822 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 NDUFS2O75306 463 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 RPP40O75818 363 aaKnown RBP15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 FGF1P05230 155 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 PIRTP0C851 137 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 CYP2A6P11509 494 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 TPSB2P20231 275 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 BCKDHBP21953 392 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 NFKBIAP25963 317 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 VIPR1P32241 457 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 ELP6Q0PNE2 266 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 KCNJ11Q14654 390 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 TPSAB1Q15661 275 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 TMEM52BQ4KMG9 183 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 ANKRD22Q5VYY1 191 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 IZUMO3Q5VZ72 239 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 DENND5AQ6IQ26 1287 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 USP45Q70EL2 814 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 DPPA4Q7L190 304 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 DEFB119Q8N690 84 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 OR52K1Q8NGK4 314 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 OR2T34Q8NGX1 318 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 MCCC1Q96RQ3 725 aaPredicted RBP15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 DPH5Q9H2P9 285 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 KDM4CQ9H3R0 1056 aa15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 EIF2B3Q9NR50 452 aaKnown RBP15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 PIH1D1Q9NWS0 290 aaKnown RBP15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 UTP11Q9Y3A2 253 aaKnown RBP15.68■□□□□ 0.1
PCDHGC3-204ENST00000617222 NPIPB15A6NHN6 443 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 H0Y858 1186 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 TSPAN6O43657 245 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 MMP20O60882 483 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 RNGTTO60942 597 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 TPH1P17752 444 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 MMP12P39900 470 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 MAGEA6P43360 314 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 RPL21P46778 160 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 RALGDSQ12967 914 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 RNASEH2BQ5TBB1 312 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 DUPD1Q68J44 220 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 CRTC1Q6UUV9 634 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 SLC36A4Q6YBV0 504 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 PCGF5Q86SE9 256 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 TSPAN33Q86UF1 283 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 PPIL6Q8IXY8 311 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 DNAAF3Q8N9W5 541 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 ZBTB44Q8NCP5 570 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 CXorf40AQ8TE69 158 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 GAB3Q8WWW8 586 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 WRAP53Q9BUR4 548 aaKnown RBP15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 RAB17Q9H0T7 212 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 C6orf106Q9H6K1 298 aaPredicted RBP15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 ARNT2Q9HBZ2 717 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 PREBQ9HCU5 417 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 SPO11Q9Y5K1 396 aa15.67■□□□□ 0.1
PCDHGC3-204ENST00000617222 A0A1W2PQU0 124 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 CAPN8A6NHC0 703 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 GOLGA8CPA6NN73 597 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 GOLGA8MH3BSY2 632 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 TMEM63AO94886 807 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 LIG3P49916 1009 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 SARNPP82979 210 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 CDK16Q00536 496 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 RPL6Q02878 288 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 CDH17Q12864 832 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 ARHGEF7Q14155 803 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 CDKN3Q16667 212 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 GLE1Q53GS7 698 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 SEL1L3Q68CR1 1132 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 DENND2CQ68D51 928 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 NEK5Q6P3R8 708 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 LIPIQ6XZB0 460 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 NAT8LQ8N9F0 302 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 BLOC1S5Q8TDH9 187 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 SNF8Q96H20 258 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 LYSMD1Q96S90 227 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 MAGEE1Q9HCI5 957 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 CASS4Q9NQ75 786 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 ANAPC5Q9UJX4 755 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 ZFR2Q9UPR6 939 aaKnown RBP15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 SHOC2Q9UQ13 582 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 PCDHGA2Q9Y5H1 932 aa15.66■□□□□ 0.1
PCDHGC3-204ENST00000617222 KMT2EQ8IZD2 1858 aa15.65■□□□□ 0.1
PCDHGC3-204ENST00000617222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.65■□□□□ 0.1
PCDHGC3-204ENST00000617222 IGLON5A6NGN9 336 aa15.65■□□□□ 0.1
PCDHGC3-204ENST00000617222 SEC31AO94979 1220 aaKnown RBP15.65■□□□□ 0.1
PCDHGC3-204ENST00000617222 HEXIM1O94992 359 aaKnown RBP15.65■□□□□ 0.1
PCDHGC3-204ENST00000617222 FSBPO95073 299 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms