RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 GOT2P00505 430 aaKnown RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 GLDCP23378 1020 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 CSHL1Q14406 222 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 CYTH1Q15438 398 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 SLC9B1Q4ZJI4 515 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 SEL1L3Q68CR1 1132 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TXNDC5Q8NBS9 432 aaKnown RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 FBXO27Q8NI29 283 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 MAPK15Q8TD08 544 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 DNAJC1Q96KC8 554 aaKnown RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 CNDP1Q96KN2 507 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 DCLRE1BQ9H816 532 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 GPAMQ9HCL2 828 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 NLE1Q9NVX2 485 aaPredicted RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 NCKIPSDQ9NZQ3 722 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 ACTL7AQ9Y615 435 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 BRCA2P51587 3418 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 GRID2O43424 1007 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TM7SF2O76062 418 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 CRTAMO95727 393 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 URODP06132 367 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TPBGLP0DKB5 382 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TFEBP19484 476 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 FDXRP22570 491 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 CPOXP36551 454 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 RGRP47804 291 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 EPHB3P54753 998 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TWF1Q12792 350 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 CXorf57Q6NSI4 855 aaKnown RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 DNAJB7Q7Z6W7 309 aaPredicted RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 SPATA6LQ8N4H0 392 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 WBP2Q969T9 261 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 CMTM5Q96DZ9 223 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 ZFRQ96KR1 1074 aaKnown RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 POMKQ9H5K3 350 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 POPDC3Q9HBV1 291 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TRPC7Q9HCX4 862 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TCF7L2Q9NQB0 619 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 TMEM39AQ9NV64 488 aa15.78■□□□□ 0.12
NR1H3-235ENST00000616973 NKX1-2Q9UD57 310 aaPredicted RBP15.78■□□□□ 0.12
NR1H3-235ENST00000616973 PTPRSQ13332 1948 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 CCDC162PA2VCL2 907 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 OR51F1A6NGY5 319 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 CCL22O00626 93 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 PRRG1O14668 218 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 ENTPD5O75356 428 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 F11P03951 625 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 CCDC166P0CW27 439 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 GNAZP19086 355 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 ELF1P32519 619 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 SUOXP51687 545 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 NAA25Q14CX7 972 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 TAF1AQ15573 450 aaPredicted RBP15.77■□□□□ 0.12
NR1H3-235ENST00000616973 TYSND1Q2T9J0 566 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 RNF219Q5W0B1 726 aaPredicted RBP15.77■□□□□ 0.12
NR1H3-235ENST00000616973 TMEM150AQ86TG1 271 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 OR4L1Q8NH43 312 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 NSMCE3Q96MG7 304 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 CCDC28BQ9BUN5 200 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 TDRD1Q9BXT4 1180 aaKnown RBP15.77■□□□□ 0.12
NR1H3-235ENST00000616973 SCUBE2Q9NQ36 999 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 CATSPERZQ9NTU4 200 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 ZDHHC2Q9UIJ5 367 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 INSL5Q9Y5Q6 135 aa15.77■□□□□ 0.12
NR1H3-235ENST00000616973 F8W8V4 182 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 SLC22A2O15244 555 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 PENKP01210 267 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 PRLP01236 227 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 IRF1P10914 325 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 MBL2P11226 248 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 NCF2P19878 526 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 SCNN1BP51168 640 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 ZNF140P52738 457 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 COPAP53621 1224 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 CDKN2DP55273 166 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 TRIM67Q6ZTA4 783 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 SDCCAG8Q86SQ7 713 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 SLC22A9Q8IVM8 553 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 SCUBE1Q8IWY4 988 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 OR13C4Q8NGS5 318 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 CDKN2AIPNLQ96HQ2 116 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 SUDS3Q9H7L9 328 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 INTS10Q9NVR2 710 aaKnown RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 C15orf41Q9Y2V0 281 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 CBX4O00257 560 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 GFRA2O00451 464 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 TSPAN3O60637 253 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 EFCAB14O75071 495 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 IPO13O94829 963 aaKnown RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 OLFM2O95897 454 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 CLTBP09497 229 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 ADSLP30566 484 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 CCR10P46092 362 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 GALNT1Q10472 559 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 KPNB1Q14974 876 aaKnown RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 KHDC1Q4VXA5 237 aaKnown RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 ZNF549Q6P9A3 640 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 ACAD11Q709F0 780 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 NET1Q7Z628 596 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms