RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TMEM74Q96NL1 305 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 CLPBQ9H078 707 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 THAP2Q9H0W7 228 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 SNX12Q9UMY4 172 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 TFR2Q9UP52 801 aa17.81■□□□□ 0.44
TRAPPC3-209ENST00000616395 CTAGE15A4D2H0 777 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 MIF4GDA9UHW6 222 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 DYNC1I1O14576 645 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 CTAGE8P0CG41 777 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 TSHRP16473 764 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 DESP17661 470 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 NOS2P35228 1153 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 PITX1P78337 314 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 NAA35Q5VZE5 725 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 C11orf63Q6NUN7 778 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 CTAGE6Q86UF2 777 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 PHF13Q86YI8 300 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 CTAGE4Q8IX94 777 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 UBL4BQ8N7F7 174 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 KYQ8NBH2 561 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 UBXN4Q92575 508 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 USP7Q93009 1102 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 RPRD1AQ96P16 312 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 LENG8Q96PV6 779 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 SLC12A9Q9BXP2 914 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 CPEB1Q9BZB8 566 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 ADAM22Q9P0K1 906 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 SIRPGQ9P1W8 387 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 CNOT8Q9UFF9 292 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 ANAPC2Q9UJX6 822 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 PLAAQ9Y263 795 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 FADS3Q9Y5Q0 445 aa17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 ZFC3H1O60293 1989 aaKnown RBP17.8■□□□□ 0.44
TRAPPC3-209ENST00000616395 EFCAB8A8MWE9 144 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 C9orf172C9J069 976 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 CES2O00748 559 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 SMAD6O43541 496 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 SNAP91O60641 907 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 LEFTY1O75610 366 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 MTA2O94776 668 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 TRUB2O95900 331 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 IGLV3-25P01717 112 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 ERBB2P04626 1255 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 ATP1A1P05023 1023 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 CYP1A2P05177 515 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 CELA2BP08218 269 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 UNGP13051 313 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 ADRB3P13945 408 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 RRM1P23921 792 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 NEK3P51956 506 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 SGCGQ13326 291 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 PTPN20Q4JDL3 420 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 FAM183BPQ6ZVS7 135 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 MCOLN2Q8IZK6 566 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 ARL10Q8N8L6 244 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 JPH3Q8WXH2 748 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 PPP1R16AQ96I34 528 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 PBKQ96KB5 322 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 TBATAQ96M53 351 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 PCDHB18PQ96TA0 734 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 SLC13A1Q9BZW2 595 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 TNKS2Q9H2K2 1166 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 SYNCQ9H7C4 482 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 PARVAQ9NVD7 372 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 IL36AQ9UHA7 158 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 SLC12A6Q9UHW9 1150 aa17.79■□□□□ 0.44
TRAPPC3-209ENST00000616395 IGLON5A6NGN9 336 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 GRAP2O75791 330 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 ACADSBP45954 432 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 THOP1P52888 689 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 MAPK10P53779 464 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 NOMO3P69849 1222 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 FAXCQ5TGI0 409 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 MEI1Q5TIA1 1274 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 BEND5Q7L4P6 421 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 TMEM110Q86TL2 294 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 STK32AQ8WU08 396 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 PSMB7Q99436 277 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 NUP85Q9BW27 656 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 CARD6Q9BX69 1037 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 C1QTNF2Q9BXJ5 285 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 MUC3BQ9H195 1237 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 LRRN3Q9H3W5 708 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 TAS2R14Q9NYV8 317 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 VPS51Q9UID3 782 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 TUBD1Q9UJT1 453 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 SCN8AQ9UQD0 1980 aa17.78■□□□□ 0.44
TRAPPC3-209ENST00000616395 GRID2IPA4D2P6 1211 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 SART1O43290 800 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 ENDOD1O94919 500 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 SLC1A1P43005 524 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 EIF4EBP2Q13542 120 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 AUHQ13825 339 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 PTK2BQ14289 1009 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 C2CD6Q53TS8 623 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 LINGO4Q6UY18 593 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 DPY19L3Q6ZPD9 716 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 PCDH19Q8TAB3 1148 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 CPA5Q8WXQ8 436 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms