RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 OR4K17Q8NGC6 315 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 IKZF3Q9UKT9 509 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 DHRS7Q9Y394 339 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 ADAM18Q9Y3Q7 739 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 UMODL1Q5DID0 1318 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 TMEM88BA6NKF7 163 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 CSDE1O75534 798 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 ITGAVP06756 1048 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 NAMPTP43490 491 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 BACE1P56817 501 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 GRIK2Q13002 908 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 ZBTB49Q6ZSB9 765 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 OTUB2Q96DC9 234 aa12.69□□□□□ -0.38
TCF4-248ENST00000616053 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
TCF4-248ENST00000616053 CIB4A0PJX0 185 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 MAGEB16A2A368 324 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 MUSKO15146 869 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ATG13O75143 517 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ZNF20P17024 532 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 DNAJA1P31689 397 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 SCNN1GP51170 649 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ACVR2BQ13705 512 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 SLC15A2Q16348 729 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 MSANTD2Q6P1R3 559 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 OFCC1Q8IZS5 231 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 COLGALT1Q8NBJ5 622 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 TMEM145Q8NBT3 493 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 TTLL8A6PVC2 850 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 LAMP2P13473 410 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ZNF37AP17032 561 aaPredicted RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 ILF2Q12905 390 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 DPYSQ14117 519 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PIK3R6Q5UE93 754 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PNPLA2Q96AD5 504 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 SPATA6Q9NWH7 488 aaPredicted RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 GMIPQ9P107 970 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ZMYM2Q9UBW7 1377 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 TEX13CA0A0J9YWL9 993 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 TM7SF2O76062 418 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 C2orf27AQ580R0 203 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 FNBP1LQ5T0N5 605 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 TAPT1Q6NXT6 567 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 SSX6Q7RTT6 188 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 SNX32Q86XE0 403 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 C12orf56Q8IXR9 622 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PNLDC1Q8NA58 520 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 ITFG1Q8TB96 612 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 SNRNP27Q8WVK2 155 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 KLHL6Q8WZ60 621 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 SPATA7Q9P0W8 599 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 MDM4O15151 490 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ERCC2P18074 760 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 HSD11B1P28845 292 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 POU5F1Q01860 360 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 ENPEPQ07075 957 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 IL18R1Q13478 541 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 LIX1LQ8IVB5 337 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 EMC1Q8N766 993 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 DNAJA4Q8WW22 397 aaPredicted RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 FAM111AQ96PZ2 611 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 EPYCQ99645 322 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 KCNE2Q9Y6J6 123 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PER2O15055 1255 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 CYP4F2P78329 520 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 RFX4Q33E94 735 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 APTXQ7Z2E3 356 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 CCDC36Q8IYA8 594 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PLA2G15Q8NCC3 412 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 TBL1YQ9BQ87 522 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 GLOD4Q9HC38 313 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 FPGTO14772 594 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PTPN5P54829 565 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.68□□□□□ -0.38
TCF4-248ENST00000616053 ZC3H14Q6PJT7 736 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 STK32CQ86UX6 486 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 ADAM32Q8TC27 787 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 DUS2Q9NX74 493 aaKnown RBP12.68□□□□□ -0.38
TCF4-248ENST00000616053 TBC1D14Q9P2M4 693 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 NUDT5Q9UKK9 219 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 PTPN23Q9H3S7 1636 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
TCF4-248ENST00000616053 JUPP14923 745 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 TGFB2P61812 414 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 MSLNQ13421 630 aaPredicted RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 LRRC32Q14392 662 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 AKAP1Q92667 903 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-248ENST00000616053 BCO2Q9BYV7 579 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 DDX18Q9NVP1 670 aaKnown RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 CLCA3PQ9Y6N3 262 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 C22orf31O95567 290 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 AGTP01019 485 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms