RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 FAM159BA6NKW6 160 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 CXorf49A8MYA2 514 aaPredicted RBP23.54■■□□□ 1.36
CCND3-223ENST00000616010 H3BQF6 201 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 AURKAO14965 403 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 BUD23O43709 281 aaKnown RBP23.54■■□□□ 1.36
CCND3-223ENST00000616010 EPHX1P07099 455 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 ERVK-10P10266 1014 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 SRFP11831 508 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 CNGA3Q16281 694 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 RASSF3Q86WH2 238 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 STK40Q8N2I9 435 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 TMBIM4Q9HC24 238 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 MED4Q9NPJ6 270 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 C20orf96Q9NUD7 363 aaPredicted RBP23.54■■□□□ 1.36
CCND3-223ENST00000616010 VPS18Q9P253 973 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 A0A0J9YYE9 177 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 CRTAMO95727 393 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 EGFP01133 1207 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 TRBC1P01850 177 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 ELAVL3Q14576 367 aaKnown RBP23.54■■□□□ 1.36
CCND3-223ENST00000616010 TMEM196Q5HYL7 178 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 CYS1Q717R9 158 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 NLRP9Q7RTR0 991 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 KCNMB4Q86W47 210 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 PPM1NQ8N819 430 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 ARL8AQ96BM9 186 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 ERLEC1Q96DZ1 483 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 OSBPL1AQ9BXW6 950 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 SLC17A6Q9P2U8 582 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 STON1Q9Y6Q2 735 aa23.54■■□□□ 1.36
CCND3-223ENST00000616010 PAPSS2O95340 614 aaPredicted RBP23.53■■□□□ 1.36
CCND3-223ENST00000616010 HNRNPLP14866 589 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCND3-223ENST00000616010 PAMP19021 973 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 TIE1P35590 1138 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 WASP42768 502 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 KIR2DL1P43626 348 aaPredicted RBP23.53■■□□□ 1.36
CCND3-223ENST00000616010 LAMB3Q13751 1172 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 TAF1AQ15573 450 aaPredicted RBP23.53■■□□□ 1.36
CCND3-223ENST00000616010 POM121L1PQ3SYA9 428 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 FSTL4Q6MZW2 842 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 CROCCP2Q86T23 111 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 OR13J1Q8NGT2 312 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 OR8D1Q8WZ84 308 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 CDKL2Q92772 493 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 LRIG1Q96JA1 1093 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 FETUBQ9UGM5 382 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 TBK1Q9UHD2 729 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 ZNF711Q9Y462 761 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 BPTFQ12830 3046 aa23.53■■□□□ 1.36
CCND3-223ENST00000616010 A0A0U1RQS6 177 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 GOLGA8KD6RF30 607 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 GOLGA8TH3BQL2 631 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 CDH16O75309 829 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 MGAT5Q09328 741 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 FRG1Q14331 258 aaKnown RBP23.52■■□□□ 1.36
CCND3-223ENST00000616010 PTPRCAPQ14761 206 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 TTMPQ5BVD1 217 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 LRRC6Q86X45 466 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 DNAJC1Q96KC8 554 aaKnown RBP23.52■■□□□ 1.36
CCND3-223ENST00000616010 PPCSQ9HAB8 311 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 SLC2A4RGQ9NR83 387 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 HACD3Q9P035 362 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 ZFATQ9P243 1243 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 BCCIPQ9P287 314 aaKnown RBP eCLIP23.52■■□□□ 1.36
CCND3-223ENST00000616010 SLC24A2Q9UI40 661 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 PHTF1Q9UMS5 762 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 CAPN8A6NHC0 703 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 CCL22O00626 93 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 VAPBO95292 243 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 ARNTP27540 789 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 MSH2P43246 934 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 GRSF1Q12849 480 aaKnown RBP eCLIP23.52■■□□□ 1.36
CCND3-223ENST00000616010 SKIDA1Q1XH10 827 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 LRRC73Q5JTD7 316 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 KIAA0930Q6ICG6 404 aaPredicted RBP23.52■■□□□ 1.36
CCND3-223ENST00000616010 BRAT1Q6PJG6 821 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 MTERF4Q7Z6M4 381 aaKnown RBP23.52■■□□□ 1.36
CCND3-223ENST00000616010 OR13C4Q8NGS5 318 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 MAGEE1Q9HCI5 957 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 PSMC3IPQ9P2W1 217 aaPredicted RBP23.52■■□□□ 1.36
CCND3-223ENST00000616010 IKBKGQ9Y6K9 419 aa23.52■■□□□ 1.36
CCND3-223ENST00000616010 ATG2BQ96BY7 2078 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 A0A1W2PQ67 120 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 C2orf81A6NN90 581 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 RGS16O15492 202 aaPredicted RBP23.51■■□□□ 1.35
CCND3-223ENST00000616010 PRNPP04156 253 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 HNF1BP35680 557 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 ZNF140P52738 457 aaPredicted RBP23.51■■□□□ 1.35
CCND3-223ENST00000616010 TMPRSS15P98073 1019 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 HSP90AA5PQ58FG0 334 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 PDPK2PQ6A1A2 396 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 LYSMD3Q7Z3D4 306 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 SLC44A1Q8WWI5 657 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 SPOCK2Q92563 424 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 DHRS4Q9BTZ2 278 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 POLR3BQ9NW08 1133 aaPredicted RBP23.51■■□□□ 1.35
CCND3-223ENST00000616010 SUN2Q9UH99 717 aa23.51■■□□□ 1.35
CCND3-223ENST00000616010 KPNA3O00505 521 aaPredicted RBP23.5■■□□□ 1.35
CCND3-223ENST00000616010 NPC1O15118 1278 aa23.5■■□□□ 1.35
CCND3-223ENST00000616010 UGT1A9O60656 530 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms