RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 RIN2Q8WYP3 895 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 SENP6Q9GZR1 1112 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 TMEM184CQ9NVA4 438 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 SLC24A2Q9UI40 661 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 LYVE1Q9Y5Y7 322 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 A0A0G2JMP0 313 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 HIST1H2ABP04908 130 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 GIMD1P0DJR0 217 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 NMT1P30419 496 aaKnown RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 NEK3P51956 506 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 CCNG1P51959 295 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 GNA13Q14344 377 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 MED22Q15528 200 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 KRBOX4Q5JUW0 171 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 HIST3H2AQ7L7L0 130 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 OR4M2Q8NGB6 313 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 ZSCAN18Q8TBC5 510 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 HIST1H2ACQ93077 130 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 RFKQ969G6 155 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 ZMYM2Q9UBW7 1377 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 DYRK3O43781 588 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 OR6A2O95222 327 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 PRAMEF1O95521 474 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 GH2P01242 217 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 OVGP1Q12889 678 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF674Q2M3X9 581 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 PPIL6Q8IXY8 311 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 FAM163AQ96GL9 167 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 SPATA31A6Q5VVP1 1343 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 UGT2B11O75310 529 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 NCS1P62166 190 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 BTBD16Q32M84 506 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 OR2L3Q8NG85 312 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 RTKNQ9BST9 563 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 E9PAM4 449 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 ATE1O95260 518 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 ZDHHC11BP0C7U3 371 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 PRKCEQ02156 737 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 MAD2L1Q13257 205 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 COL28A1Q2UY09 1125 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 DENND1BQ6P3S1 775 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 RAB2BQ8WUD1 216 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 OR14A2Q96R54 314 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 PPP1R14DQ9NXH3 145 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 SNRNP35Q16560 246 aaKnown RBP9.31□□□□□ -0.92
COL12A1-211ENST00000615798 RIPOR1Q6ZS17 1223 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 SPATA22Q8NHS9 363 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 SLC39A10Q9ULF5 831 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 KIAA1257Q9ULG3 409 aa9.31□□□□□ -0.92
COL12A1-211ENST00000615798 RAD51CO43502 376 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 BCAS1O75363 584 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 RAD17O75943 681 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 CDK9P50750 372 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ATXN1P54253 815 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 GADL1Q6ZQY3 521 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 LRMDAQ9H2I8 198 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 GOLPH3Q9H4A6 298 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ANKZF1Q9H8Y5 726 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 UNKLQ9H9P5 680 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 TMEM216Q9P0N5 145 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SAMD4AQ9UPU9 718 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PXDNQ92626 1479 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 DOCK7Q96N67 2140 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 TCP10L2B9ZVM9 353 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF35P13682 527 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 CD58P19256 250 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 FKBP1AP62942 108 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 C15orf52Q6ZUT6 534 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 USP43Q70EL4 1123 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PAQR7Q86WK9 346 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 CCDC54Q8NEL0 328 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 NUDT15Q9NV35 164 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 NKIRAS2Q9NYR9 191 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 EIF2B4Q9UI10 523 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PARP4Q9UKK3 1724 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF705EA8MWA4 302 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PET100P0DJ07 73 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PTENP60484 403 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 NME3Q13232 169 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 NIPA1Q7RTP0 329 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 SPPL2AQ8TCT8 520 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 REPS1Q96D71 796 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 TCF12Q99081 682 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 JPH1Q9HDC5 661 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 RAB6BQ9NRW1 208 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 RBAKQ9NYW8 714 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 RIMS1Q86UR5 1692 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF705GA8MUZ8 300 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 NMT2O60551 498 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 HSD17B4P51659 736 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 PTRHD1Q6GMV3 140 aaKnown RBP9.3□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF302Q9NR11 478 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 DAGLAQ9Y4D2 1042 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 DUOX1Q9NRD9 1551 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 KLHL26Q53HC5 615 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 DNAJB14Q8TBM8 379 aa9.3□□□□□ -0.92
COL12A1-211ENST00000615798 UPF1Q92900 1129 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms