RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ABTB1Q969K4 478 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 AP2M1Q96CW1 435 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SHDQ96IW2 340 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 FLRT1Q9NZU1 646 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TAGLN3Q9UI15 199 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SCN7AQ01118 1682 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 URADA6NGE7 173 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ATG13O75143 517 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 MT-CO1P00395 513 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 ABRQ12979 859 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 RASA2Q15283 850 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 IL27RAQ6UWB1 636 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PACS1Q6VY07 963 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 BNC2Q6ZN30 1099 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SLC44A2Q8IWA5 706 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 CENPLQ8N0S6 344 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 LRRN4CLQ8ND94 238 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 PLEKHO2Q8TD55 490 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 OTULINQ96BN8 352 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 FERD3LQ96RJ6 166 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 BBS4Q96RK4 519 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SMOQ99835 787 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 HSD3B7Q9H2F3 369 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 SEMA4BQ9NPR2 832 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 GKN1Q9NS71 199 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 DNAJB4Q9UDY4 337 aa9.48□□□□□ -0.89
CLTCL1-208ENST00000615606 TCRBV9S1A1TA0A576 114 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 MBLAC1A4D2B0 266 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 HNRNPCL2B2RXH8 293 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CDK14O94921 469 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 PIGNO95427 931 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CSKP41240 450 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 DMC1Q14565 340 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 LRRC23Q53EV4 343 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 C16orf46Q6P387 395 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 GLMNQ92990 594 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 EME1Q96AY2 570 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CCDC90BQ9GZT6 254 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 KRCC1Q9NPI7 259 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 KLC4Q9NSK0 619 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 KLQ9UEF7 1012 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 PSME2Q9UL46 239 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ANKRD36CQ5JPF3 1778 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 DDX60Q8IY21 1712 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 FAM237BA0A1B0GVD1 139 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 RASSF10A6NK89 507 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 AVILO75366 819 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 BANF1O75531 89 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 HNRNPA1P09651 372 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 NUDT17P0C025 328 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 PKMP14618 531 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CALB2P22676 271 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 PSMA4P25789 261 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CST5P28325 142 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 TLX1P31314 330 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 RPL14P50914 215 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ZBTB17Q13105 803 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CBX2Q14781 532 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ATAD3BQ5T9A4 648 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 MFSD5Q6N075 450 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 DRICH1Q6PGQ1 229 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 RNF19BQ6ZMZ0 732 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ZNF614Q8N883 585 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 FAM120BQ96EK7 910 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 LINGO1Q96FE5 620 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ZMAT2Q96NC0 199 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ARMC7Q9H6L4 198 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 TRPC4Q9UBN4 977 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ENTPD4Q9Y227 616 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 KCNE2Q9Y6J6 123 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ISM1B1AKI9 464 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CCNDBP1O95273 360 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 RB1P06400 928 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 IDSP22304 550 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 POLD2P49005 469 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 RPS24P62847 133 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 DLG2Q15700 870 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CARD16Q5EG05 197 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CNSTQ6PJW8 725 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 GRASPQ7Z6J2 395 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 TSEN2Q8NCE0 465 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ZNF75CPQ92670 426 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 CRTAC1Q9NQ79 661 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 PCDHGC4Q9Y5F7 938 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ATXN1P54253 815 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ECT2LQ008S8 904 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 FBXL22Q6P050 247 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 PRMT9Q6P2P2 845 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 VITQ6UXI7 678 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 PIWIL4Q7Z3Z4 852 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 SYT12Q8IV01 421 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 AHI1Q8N157 1196 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 MIER2Q8N344 545 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 KCTD4Q8WVF5 259 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 TEKT5Q96M29 485 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 WARS2Q9UGM6 360 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 MAFFQ9ULX9 164 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 NR2E1Q9Y466 385 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 TCAF1Q9Y4C2 921 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms