RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ETS1P14921 441 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 GNSP15586 552 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 RBL1P28749 1068 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 HNF1BP35680 557 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 MMP12P39900 470 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 VAV2P52735 878 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 SLC20A2Q08357 652 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 BYSLQ13895 437 aaKnown RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 SPARCL1Q14515 664 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 SPA17Q15506 151 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 DEFB133Q30KQ1 61 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 SPDYCQ5MJ68 293 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 LIPIQ6XZB0 460 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 DSG4Q86SJ6 1040 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 TRIM69Q86WT6 500 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 TMTC1Q8IUR5 882 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 NAXDQ8IW45 347 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 RHOT2Q8IXI1 618 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 RHBDD1Q8TEB9 315 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 SAP25Q8TEE9 199 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 IQCDQ96DY2 449 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 OXNAD1Q96HP4 312 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ELF4Q99607 663 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 C1QTNF2Q9BXJ5 285 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 BPIFA1Q9NP55 256 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 SCUBE2Q9NQ36 999 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 DNAJC28Q9NX36 388 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 FARP1Q9Y4F1 1045 aaPredicted RBP5.73□□□□□ -1.49
CPNE3-208ENST00000614678 RAI2Q9Y5P3 530 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 ATRXP46100 2492 aa5.73□□□□□ -1.49
CPNE3-208ENST00000614678 CCDC78A2IDD5 438 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 GOLGA6CA6NDK9 693 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 GOLGA6BA6NDN3 693 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 VILLO15195 856 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 ALOX15BO15296 676 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 MTX2O75431 263 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SOD1P00441 154 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 GOLGA6DP0CG33 693 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 GRIA4P48058 902 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PTSQ03393 145 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 BCL2L1Q07817 233 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 STAT4Q14765 748 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SMAD1Q15797 465 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SMYD5Q6GMV2 418 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 KIAA1328Q86T90 577 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PSTKQ8IV42 348 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 RHOT1Q8IXI2 618 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 CCDC170Q8IYT3 715 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 TEX26Q8N6G2 289 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 LPCAT1Q8NF37 534 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PATE1Q8WXA2 126 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SCNM1Q9BWG6 230 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 CLPBQ9H078 707 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 DNAAF2Q9NVR5 837 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 GOLGA6AQ9NYA3 693 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SPO11Q9Y5K1 396 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 LRP4O75096 1905 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 UPK3BL1B0FP48 263 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 UPK3BL2E5RIL1 263 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 APOL1O14791 398 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 MATN3O15232 486 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PMPCBO75439 489 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 F7P08709 466 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PTPN3P26045 913 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 MAN1A1P33908 653 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 LRRC66Q68CR7 880 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 DHRS13Q6UX07 377 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 KANSL1Q7Z3B3 1105 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PAF1Q8N7H5 531 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 ACTL9Q8TC94 416 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 MAML1Q92585 1016 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 WDR24Q96S15 920 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PPP1R9BQ96SB3 815 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SCML1Q9UN30 329 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 TMEM98Q9Y2Y6 226 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 URB1O60287 2271 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 PIEZO2Q9H5I5 2752 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 LY6G6EA0A0G2JKS1 128 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 INPP4BO15327 924 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 HTRA2O43464 458 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 FZD6O60353 706 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 KRT7P08729 469 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 HNRNPA2B1P22626 353 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 DGKAP23743 735 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 CYLC1P35663 651 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 CCR5P51681 352 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 C21orf59P57076 290 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SKOR1P84550 965 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 OTUD4Q01804 1114 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 MTA1Q13330 715 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 TRIP6Q15654 476 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 TAZQ16635 292 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 NAPEPLDQ6IQ20 393 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 CCDC110Q8TBZ0 833 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 KLHDC7BQ96G42 594 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 CPEB1Q9BZB8 566 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 FGF22Q9HCT0 170 aa5.72□□□□□ -1.49
CPNE3-208ENST00000614678 TRMT1Q9NXH9 659 aaKnown RBP5.72□□□□□ -1.49
CPNE3-208ENST00000614678 SEPT3Q9UH03 358 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms