RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TSHRP16473 764 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 NFKBIAP25963 317 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 ACTN2P35609 894 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 HK3P52790 923 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 SLC25A11Q02978 314 aaKnown RBP17.45■□□□□ 0.38
PRKN-209ENST00000612485 RALGDSQ12967 914 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 KRT81Q14533 505 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 HADHQ16836 314 aaKnown RBP17.45■□□□□ 0.38
PRKN-209ENST00000612485 ESRP1Q6NXG1 681 aaKnown RBP17.45■□□□□ 0.38
PRKN-209ENST00000612485 GUSBP11Q6P575 273 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 LRRC69Q6ZNQ3 347 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 HID1Q8IV36 788 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 SDR16C5Q8N3Y7 309 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 SCG3Q8WXD2 468 aaKnown RBP17.45■□□□□ 0.38
PRKN-209ENST00000612485 NAT6Q93015 286 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 CLPBQ9H078 707 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 RCOR3Q9P2K3 495 aaPredicted RBP17.45■□□□□ 0.38
PRKN-209ENST00000612485 OR1A2Q9Y585 309 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 PCDHB1Q9Y5F3 818 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRKN-209ENST00000612485 YY2O15391 372 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 RRP8O43159 456 aaKnown RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 TLX3O43711 291 aaPredicted RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 BRINP1O60477 761 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 MAFKO60675 156 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 SOCS5O75159 536 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 CSO75390 466 aaKnown RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 RECQL5O94762 991 aaPredicted RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 PEX11BO96011 259 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 EIF2S3P41091 472 aaKnown RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 SSR1P43307 286 aaKnown RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 ABCG1P45844 678 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 CDH6P55285 790 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 ALG11Q2TAA5 492 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 RALGPS1Q5JS13 557 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 TXNRD3NBQ6F5E7 133 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 LVRNQ6Q4G3 990 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 LIPIQ6XZB0 460 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 SNIP1Q8TAD8 396 aaKnown RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 SPOCK2Q92563 424 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 FGF11Q92914 225 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 TSACCQ96A04 125 aaPredicted RBP17.44■□□□□ 0.38
PRKN-209ENST00000612485 WDR92Q96MX6 357 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 NUDCD1Q96RS6 583 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 KLQ9UEF7 1012 aa17.44■□□□□ 0.38
PRKN-209ENST00000612485 CACNB4O00305 520 aaPredicted RBP17.43■□□□□ 0.38
PRKN-209ENST00000612485 HTRA2O43464 458 aaPredicted RBP17.43■□□□□ 0.38
PRKN-209ENST00000612485 TNFP01375 233 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 CR2P20023 1033 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 KELP23276 732 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 CASP14P31944 242 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 KIAA1024LP59773 190 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 SRP54P61011 504 aaKnown RBP17.43■□□□□ 0.38
PRKN-209ENST00000612485 ZSCAN23Q3MJ62 389 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 MARC1Q5VT66 337 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 RD3Q7Z3Z2 195 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 GKN2Q86XP6 184 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 LRRC49Q8IUZ0 686 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 SLC35F3Q8IY50 421 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 LSMEM2Q8N112 164 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 WDR48Q8TAF3 677 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 ZNF564Q8TBZ8 553 aaPredicted RBP17.43■□□□□ 0.38
PRKN-209ENST00000612485 GRAMD1AQ96CP6 724 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 MGME1Q9BQP7 344 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 LRRK1Q38SD2 2015 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 ITPR1Q14643 2758 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 ANKRD36A6QL64 1941 aa17.43■□□□□ 0.38
PRKN-209ENST00000612485 CACNA1GO43497 2377 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 TTC24A2A3L6 582 aaPredicted RBP17.42■□□□□ 0.38
PRKN-209ENST00000612485 USP12O75317 370 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 CPP00450 1065 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 HOXC4P09017 264 aaPredicted RBP17.42■□□□□ 0.38
PRKN-209ENST00000612485 TGM2P21980 687 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 MMP13P45452 471 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 ACOX1Q15067 660 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 TBC1D25Q3MII6 688 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 ARL10Q8N8L6 244 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 PLA2G15Q8NCC3 412 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 FAM71BQ8TC56 605 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 PDCD6IPQ8WUM4 868 aaKnown RBP17.42■□□□□ 0.38
PRKN-209ENST00000612485 NSMCE3Q96MG7 304 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 XPO4Q9C0E2 1151 aaKnown RBP17.42■□□□□ 0.38
PRKN-209ENST00000612485 KCTD5Q9NXV2 234 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 UVRAGQ9P2Y5 699 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 B4GALT6Q9UBX8 382 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 LCMT1Q9UIC8 334 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 PADI4Q9UM07 663 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 PHTF1Q9UMS5 762 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 PCDHGC4Q9Y5F7 938 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 DGKBQ9Y6T7 804 aa17.42■□□□□ 0.38
PRKN-209ENST00000612485 NBEAQ8NFP9 2946 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 A8MX80 341 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 TCEA3O75764 348 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 CELA2BP08218 269 aaPredicted RBP17.41■□□□□ 0.38
PRKN-209ENST00000612485 CYP2A6P11509 494 aaPredicted RBP17.41■□□□□ 0.38
PRKN-209ENST00000612485 HNRNPH3P31942 346 aaKnown RBP17.41■□□□□ 0.38
PRKN-209ENST00000612485 VIPR1P32241 457 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 GABREP78334 506 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 ISXQ2M1V0 245 aa17.41■□□□□ 0.38
PRKN-209ENST00000612485 SKOR2Q2VWA4 1001 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms