RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 GSPT2Q8IYD1 628 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 BRSK1Q8TDC3 778 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 PTCD2Q8WV60 388 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 HNRNPLLQ8WVV9 542 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 CAVIN3Q969G5 261 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 ARRDC3Q96B67 414 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 RMDN1Q96DB5 314 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 SCRN2Q96FV2 425 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 PPP1R16AQ96I34 528 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 MCCC1Q96RQ3 725 aaPredicted RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 PRRX2Q99811 253 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 IER2Q9BTL4 223 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 CHRDQ9H2X0 955 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 MAGEE1Q9HCI5 957 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 HACD3Q9P035 362 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 TEX264Q9Y6I9 313 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 ZFHX2Q9C0A1 2572 aaPredicted RBP16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 KPNA3O00505 521 aaPredicted RBP16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 ADRA1DP25100 572 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 NFKBIAP25963 317 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 MAGEA4P43358 317 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 MAGEA9P43362 315 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 DGKEP52429 567 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 LAMB3Q13751 1172 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 CST6Q15828 149 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 BBS9Q3SYG4 887 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 PCID2Q5JVF3 399 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 CFAP58Q5T655 872 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 MAMSTRQ6ZN01 415 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 ASCL5Q7RTU5 278 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 TMPRSS6Q8IU80 811 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 FAM131CQ96AQ9 280 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 EBNA1BP2Q99848 306 aaKnown RBP16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 WDR83Q9BRX9 315 aaKnown RBP16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 NAT9Q9BTE0 207 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 KIFC1Q9BW19 673 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 MKRN2Q9H000 416 aaKnown RBP16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 TRABDQ9H4I3 376 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 MRM3Q9HC36 420 aaKnown RBP16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 SAYSD1Q9NPB0 183 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 PIH1D1Q9NWS0 290 aaKnown RBP16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 RIMKLBQ9ULI2 386 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 SIT1Q9Y3P8 196 aa16.04■□□□□ 0.16
CLTCL1-207ENST00000611723 UPK3BL1B0FP48 263 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 UPK3BL2E5RIL1 263 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 ERLIN1O75477 346 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 TSHRP16473 764 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 PSMA3P25788 255 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 ELK3P41970 407 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 CCDC15Q0P6D6 951 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 CDKN3Q16667 212 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 CCDC38Q502W7 563 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 USP45Q70EL2 814 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 ERN2Q76MJ5 926 aaKnown RBP16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 PARS2Q7L3T8 475 aaKnown RBP16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 NLRP9Q7RTR0 991 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 TTC7BQ86TV6 843 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 CCDC25Q86WR0 208 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 IGDCC3Q8IVU1 814 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 MPP5Q8N3R9 675 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 SPEM1Q8N4L4 309 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 RAB7BQ96AH8 199 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 C19orf43Q9BQ61 176 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 SYBUQ9NX95 663 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 SOX13Q9UN79 622 aa16.03■□□□□ 0.16
CLTCL1-207ENST00000611723 FAM237BA0A1B0GVD1 139 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 HEATR9A2RTY3 570 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 MROH6A6NGR9 719 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 CAPN8A6NHC0 703 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 STK25O00506 426 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 MID1O15344 667 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 BANF1O75531 89 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 PAPSS2O95340 614 aaPredicted RBP16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 H2AFXP16104 143 aaPredicted RBP16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 DRD3P35462 400 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 HNF1BP35680 557 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 PSMD8P48556 350 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 METAP1P53582 386 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 TAF1AQ15573 450 aaPredicted RBP16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 TRMT10CQ7L0Y3 403 aaKnown RBP16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 TMC3Q7Z5M5 1100 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 TMEM135Q86UB9 458 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 ZBED8Q8IZ13 594 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 MDGA1Q8NFP4 955 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 PYROXD1Q8WU10 500 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 PEX13Q92968 403 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 STAMBPL1Q96FJ0 436 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 MRGPRX1Q96LB2 322 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 PABPC3Q9H361 631 aaKnown RBP16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 POLMQ9NP87 494 aaPredicted RBP16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 PCDH12Q9NPG4 1184 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 DYRK4Q9NR20 520 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 TCAF1Q9Y4C2 921 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 SPO11Q9Y5K1 396 aa16.02■□□□□ 0.16
CLTCL1-207ENST00000611723 AREL1O15033 823 aa16.01■□□□□ 0.15
CLTCL1-207ENST00000611723 LDB2O43679 373 aa16.01■□□□□ 0.15
CLTCL1-207ENST00000611723 CRTAMO95727 393 aa16.01■□□□□ 0.15
CLTCL1-207ENST00000611723 TTC4O95801 387 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms