RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 FAM45AQ8TCE6 357 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 WBP2Q969T9 261 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 OR52B2Q96RD2 323 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 DDX50Q9BQ39 737 aaKnown RBP28.15■■■□□ 2.1
CSPG5-205ENST00000610462 POMKQ9H5K3 350 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 TBX21Q9UL17 535 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 SEC23IPQ9Y6Y8 1000 aaKnown RBP28.15■■■□□ 2.1
CSPG5-205ENST00000610462 CD3EAPO15446 510 aaKnown RBP28.15■■■□□ 2.1
CSPG5-205ENST00000610462 INSIG1O15503 277 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 GRID2O43424 1007 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 TSPAN3O60637 253 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 SNUPNO95149 360 aaKnown RBP28.15■■■□□ 2.1
CSPG5-205ENST00000610462 WISP3O95389 354 aaPredicted RBP28.15■■■□□ 2.1
CSPG5-205ENST00000610462 CR2P20023 1033 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 CCNYL1Q8N7R7 359 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 WDR60Q8WVS4 1066 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 TOP1MTQ969P6 601 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 ZNF689Q96CS4 500 aaPredicted RBP28.15■■■□□ 2.1
CSPG5-205ENST00000610462 CMTM5Q96DZ9 223 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 SGF29Q96ES7 293 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 FAM161BQ96MY7 647 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 CCDC162PA2VCL2 907 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 E9PBE3 544 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 BUD23O43709 281 aaKnown RBP28.14■■■□□ 2.1
CSPG5-205ENST00000610462 KLHL41O60662 606 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 RBP1P09455 135 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 PIRTP0C851 137 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 SERPINB5P36952 375 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 CCNG1P51959 295 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 COPAP53621 1224 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 CDKN2DP55273 166 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 RAB33AQ14088 237 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 PTPRCAPQ14761 206 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 ACAP2Q15057 778 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 CYTH1Q15438 398 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 ACSBG2Q5FVE4 666 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 MRNIPQ6NTE8 343 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 PIWIL4Q7Z3Z4 852 aaKnown RBP28.14■■■□□ 2.1
CSPG5-205ENST00000610462 RNF135Q8IUD6 432 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 POU5F2Q8N7G0 328 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 OR13C4Q8NGS5 318 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 CCDC126Q96EE4 140 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 NSMCE3Q96MG7 304 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 NCKIPSDQ9NZQ3 722 aa28.14■■■□□ 2.1
CSPG5-205ENST00000610462 PRDX6P30041 224 aa28.14■■■□□ 2.09
CSPG5-205ENST00000610462 SLC26A3P40879 764 aa28.14■■■□□ 2.09
CSPG5-205ENST00000610462 SCNN1BP51168 640 aa28.14■■■□□ 2.09
CSPG5-205ENST00000610462 CFAP61Q8NHU2 1237 aa28.14■■■□□ 2.09
CSPG5-205ENST00000610462 THTPAQ9BU02 230 aa28.14■■■□□ 2.09
CSPG5-205ENST00000610462 CORO1CQ9ULV4 474 aaPredicted RBP28.14■■■□□ 2.09
CSPG5-205ENST00000610462 ARIH1Q9Y4X5 557 aaPredicted RBP28.14■■■□□ 2.09
CSPG5-205ENST00000610462 DCXO43602 365 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 ZBTB14O43829 449 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 CES1P23141 567 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 TWF1Q12792 350 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 NAA25Q14CX7 972 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 TRIM67Q6ZTA4 783 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 C16orf59Q7L2K0 433 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 HERC6Q8IVU3 1022 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 PHTF2Q8N3S3 785 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 SCUBE2Q9NQ36 999 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 ANKRD36A6QL64 1941 aa28.13■■■□□ 2.09
CSPG5-205ENST00000610462 MEI4A8MW99 385 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 H0Y3Z8 333 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 PRRG1O14668 218 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 HTRA3P83110 453 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 NSUN2Q08J23 767 aaKnown RBP eCLIP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 RNF219Q5W0B1 726 aaPredicted RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 CXorf57Q6NSI4 855 aaKnown RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 DNAJB7Q7Z6W7 309 aaPredicted RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 ULK2Q8IYT8 1036 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 ANKRD49Q8WVL7 239 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 CNDP1Q96KN2 507 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 CATSPERZQ9NTU4 200 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 STOML2Q9UJZ1 356 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 CRYL1Q9Y2S2 319 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 CBX4O00257 560 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 CRTAMO95727 393 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 HOXB8P17481 243 aaPredicted RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 OGNP20774 298 aaKnown RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 KLF10Q13118 480 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 C1orf53Q5VUE5 145 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 NET1Q7Z628 596 aaPredicted RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 OR4L1Q8NH43 312 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 EXOC2Q96KP1 924 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 SHCBP1LQ9BZQ2 653 aa28.12■■■□□ 2.09
CSPG5-205ENST00000610462 WDR55Q9H6Y2 383 aaPredicted RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 NLE1Q9NVX2 485 aaPredicted RBP28.12■■■□□ 2.09
CSPG5-205ENST00000610462 GOLGA8QA0A0J9YX86 632 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 GOLGA8OA6NCC3 632 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 NEMP2A6NFY4 417 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 GOLGA8NF8WBI6 632 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 FDXRP22570 491 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 RFC2P35250 354 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 SEMA3AQ14563 771 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 TMEM207Q6UWW9 146 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 SPNS2Q8IVW8 549 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 CDKN2AIPNLQ96HQ2 116 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 MUC3BQ9H195 1237 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 SPO11Q9Y5K1 396 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms