RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZNF487B1APH4 448 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 CD86P42081 329 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 CDKN2DP55273 166 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 TMEM26Q6ZUK4 368 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 PIWIL4Q7Z3Z4 852 aaKnown RBP20.49■□□□□ 0.87
SSBP3-216ENST00000610401 ISL2Q96A47 359 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 THAP11Q96EK4 314 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 VPS50Q96JG6 964 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 ARMC7Q9H6L4 198 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 SLAMF8Q9P0V8 285 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 FAM50BQ9Y247 325 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 NRCAMQ92823 1304 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 DOCK1Q14185 1865 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 A0A0G2JLL6 359 aaPredicted RBP20.49■□□□□ 0.87
SSBP3-216ENST00000610401 A0A0U1RQS6 177 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 KPNA6O60684 536 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 GPR32O75388 356 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 POMCP01189 267 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 OR4Q2P0C623 313 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 SMIM10L2AP0DMW4 78 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 SMIM10L2BP0DMW5 78 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 BRCC3P46736 316 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 DIO3P55073 304 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 CYP51A1Q16850 503 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 PRRT2Q7Z6L0 340 aaPredicted RBP20.49■□□□□ 0.87
SSBP3-216ENST00000610401 C12orf43Q96C57 262 aaKnown RBP20.49■□□□□ 0.87
SSBP3-216ENST00000610401 KIFC1Q9BW19 673 aa20.49■□□□□ 0.87
SSBP3-216ENST00000610401 MAGED1Q9Y5V3 778 aaPredicted RBP20.49■□□□□ 0.87
SSBP3-216ENST00000610401 UBA6A0AVT1 1052 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 H3BNH8 94 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 UBXN8O00124 270 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 EI24O14681 340 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 ATP6V1G1O75348 118 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 DARSP14868 501 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 IREB2P48200 963 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 ARCN1P48444 511 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 EMP3P54852 163 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 GALNT2Q10471 571 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 KYAT1Q16773 422 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 OGFOD2Q6N063 350 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 CIR1Q86X95 450 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 FUNDC1Q8IVP5 155 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 BLOC1S5Q8TDH9 187 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 IGSF5Q9NSI5 407 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 ANKRD6Q9Y2G4 727 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 NME4O00746 187 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 CRCPO75575 148 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 STAU1O95793 577 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 MMP3P08254 477 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 WNT3AP56704 352 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 BNIP3Q12983 259 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 DENND5AQ6IQ26 1287 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 TMEM207Q6UWW9 146 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 SCN4BQ8IWT1 228 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 POLR1BQ9H9Y6 1135 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 GLOD4Q9HC38 313 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 UTP6Q9NYH9 597 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 TRHDEQ9UKU6 1024 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 ANGPT2O15123 496 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 GFAPP14136 432 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 CD247P20963 164 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 SNX17Q15036 470 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 FGD3Q5JSP0 725 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 EFHD1Q9BUP0 239 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 OSBPL11Q9BXB4 747 aa20.48■□□□□ 0.87
SSBP3-216ENST00000610401 CLK4Q9HAZ1 481 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 CHCHD3Q9NX63 227 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 DUS2Q9NX74 493 aaKnown RBP20.48■□□□□ 0.87
SSBP3-216ENST00000610401 SLCO1B7G3V0H7 640 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 PTGESO14684 152 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 PIP5K1BO14986 540 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 PIM1P11309 404 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-216ENST00000610401 FUT4P22083 530 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 CCR1P32246 355 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 ESRRGP62508 458 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 SH3BP2P78314 561 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 UGP2Q16851 508 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 C14orf80Q86SX3 495 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 NT5C3BQ969T7 300 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 FCRL2Q96LA5 508 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-216ENST00000610401 TSPYL2Q9H2G4 693 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-216ENST00000610401 TCAF1Q9Y4C2 921 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 J3KR12 359 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 MAN1A2O60476 641 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 KCNH1O95259 989 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 ATE1O95260 518 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 ZNF23P17027 643 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 DSC2Q02487 901 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 RALGPS2Q86X27 583 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-216ENST00000610401 PTGR2Q8N8N7 351 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-216ENST00000610401 DQX1Q8TE96 717 aaKnown RBP20.47■□□□□ 0.87
SSBP3-216ENST00000610401 GIPC3Q8TF64 312 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 ZNF597Q96LX8 424 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 SMIM14Q96QK8 99 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 MIOSQ9NXC5 875 aa20.47■□□□□ 0.87
SSBP3-216ENST00000610401 PAGE1O75459 146 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 HSPA13P48723 471 aa20.46■□□□□ 0.87
SSBP3-216ENST00000610401 NOL9Q5SY16 702 aaKnown RBP20.46■□□□□ 0.87
SSBP3-216ENST00000610401 HECTD2Q5U5R9 776 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms