RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 SPON2Q9BUD6 331 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 EML4Q9HC35 981 aaKnown RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 GPAMQ9HCL2 828 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 TCF7L2Q9NQB0 619 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 INTS10Q9NVR2 710 aaKnown RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 SPG21Q9NZD8 308 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 AGO1Q9UL18 857 aaKnown RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 VPS9D1Q9Y2B5 631 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 BRCA2P51587 3418 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 TYW5A2RUC4 315 aaKnown RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 TRPC5OSA6NMA1 111 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 PRRG1O14668 218 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 PFDN6O15212 129 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 CIB2O75838 187 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 WISP3O95389 354 aaPredicted RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 PIGNO95427 931 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 GLDCP23378 1020 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 PFKPQ01813 784 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 DLG1Q12959 904 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 USP4Q13107 963 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 E2F5Q15329 346 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 TAF1AQ15573 450 aaPredicted RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 TRMT5Q32P41 509 aaKnown RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 TRIM60Q495X7 471 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 INO80DQ53TQ3 878 aaPredicted RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 TECRLQ5HYJ1 363 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 RBM20Q5T481 1227 aaKnown RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 NET1Q7Z628 596 aaPredicted RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 SCUBE1Q8IWY4 988 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 OR4L1Q8NH43 312 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 BLOC1S5Q8TDH9 187 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 TBATAQ96M53 351 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 PRICKLE1Q96MT3 831 aaPredicted RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 ADGRE3Q9BY15 652 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 NLE1Q9NVX2 485 aaPredicted RBP12□□□□□ -0.49
USP6NL-206ENST00000609853 PLA2G4CQ9UP65 541 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 L3MBTL1Q9Y468 752 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 ASB3Q9Y575 518 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 COL4A6Q14031 1691 aa12□□□□□ -0.49
USP6NL-206ENST00000609853 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 C2orf81A6NN90 581 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 AURKAO14965 403 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 IPO13O94829 963 aaKnown RBP11.99□□□□□ -0.49
USP6NL-206ENST00000609853 CCDC166P0CW27 439 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 TPBGLP0DKB5 382 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 NCF2P19878 526 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-206ENST00000609853 PPM1AP35813 382 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 SUOXP51687 545 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 ARSDP51689 593 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 MXRA7P84157 204 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 CSHL1Q14406 222 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 ZNF460Q14592 562 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 TYSND1Q2T9J0 566 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 DNAJB7Q7Z6W7 309 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-206ENST00000609853 HJURPQ8NCD3 748 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-206ENST00000609853 OLFM1Q99784 485 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 RC3H2Q9HBD1 1191 aaKnown RBP11.99□□□□□ -0.49
USP6NL-206ENST00000609853 CATSPERZQ9NTU4 200 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 TMEM39AQ9NV64 488 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 STOML1Q9UBI4 398 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 SSX2IPQ9Y2D8 614 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 C15orf41Q9Y2V0 281 aa11.99□□□□□ -0.49
USP6NL-206ENST00000609853 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 TTC24A2A3L6 582 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 ENTPD5O75356 428 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 GOT2P00505 430 aaKnown RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 CHRNGP07510 517 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 GM2AP17900 193 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 FDXRP22570 491 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 MPSTP25325 297 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 PMLP29590 882 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 GCKP35557 465 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 CPOXP36551 454 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 SCNN1BP51168 640 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 GTF2A1P52655 376 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 STC1P52823 247 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 SATB1Q01826 763 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 NAA25Q14CX7 972 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 ZNF789Q5FWF6 425 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 SH2D4BQ5SQS7 431 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 AFTPHQ6ULP2 937 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 LSMEM2Q8N112 164 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 CPSF7Q8N684 471 aaKnown RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 USP13Q92995 863 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 STMN2Q93045 179 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 CDKN2AIPNLQ96HQ2 116 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 DNAJC1Q96KC8 554 aaKnown RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 ASB2Q96Q27 587 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 NDNQ99608 321 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 TDRD1Q9BXT4 1180 aaKnown RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 RNF38Q9H0F5 515 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 MUC3BQ9H195 1237 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 POMKQ9H5K3 350 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 MRPL17Q9NRX2 175 aaKnown RBP11.98□□□□□ -0.49
USP6NL-206ENST00000609853 GKN1Q9NS71 199 aa11.98□□□□□ -0.49
USP6NL-206ENST00000609853 HACD3Q9P035 362 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms