RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MAP7D2Q96T17 732 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 SDF4Q9BRK5 362 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 STRA6Q9BX79 667 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 KIF9Q9HAQ2 790 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 SCPEP1Q9HB40 452 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 MAGEE1Q9HCI5 957 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 FBRSL1Q9HCM7 1045 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 ASAH2Q9NR71 780 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 CORO1CQ9ULV4 474 aaPredicted RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 AAR2Q9Y312 384 aaKnown RBP4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 UTYO14607 1347 aa4.44□□□□□ -1.7
SMCHD1-213ENST00000609587 RPS10-NUDT3A0A1W2PQS6 291 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 A0A1W2PRG0 241 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 KDM4EB2RXH2 506 aaPredicted RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 PRR23D1E9PI22 279 aaPredicted RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 I6L893 689 aaPredicted RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 AP3D1O14617 1153 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 LDB2O43679 373 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 DOK2O60496 412 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 HNRNPCL1O60812 293 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 PRR23D2P0DMB1 279 aaPredicted RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 AGAP20933 346 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 GNLYP22749 145 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 SHMT1P34896 483 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 THPOP40225 353 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 DRG2P55039 364 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 CEBPZQ03701 1054 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 COL28A1Q2UY09 1125 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 ZNF284Q2VY69 593 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 TTI2Q6NXR4 508 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 NCEH1Q6PIU2 408 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 IKBIPQ70UQ0 350 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 ZNF367Q7RTV3 350 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 SFTPA2Q8IWL1 248 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 CREB3L4Q8TEY5 395 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 ZNF570Q96NI8 536 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 CYSLTR2Q9NS75 346 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 SEPT11Q9NVA2 429 aaKnown RBP4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 HCFC1R1Q9NWW0 138 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 PLK2Q9NYY3 685 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 DLGAP2Q9P1A6 1054 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 SLCO3A1Q9UIG8 710 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 RAI2Q9Y5P3 530 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 LYVE1Q9Y5Y7 322 aa4.43□□□□□ -1.7
SMCHD1-213ENST00000609587 RUSC2Q8N2Y8 1516 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 MYMKA6NI61 221 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 LIPT2A6NK58 231 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 PRSS47A8MTI9 375 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 H3BNX3 289 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 GTPBP1O00178 669 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 ITM2AO43736 263 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 MLYCDO95822 493 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 MMP2P08253 660 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 PPARGP37231 505 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 PMS2P54278 862 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 ST3GAL1Q11201 340 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 CSTF3Q12996 717 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 TRAF1Q13077 416 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 OLIG2Q13516 323 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 PDE1CQ14123 709 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 MYBPC2Q14324 1141 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 DRAP1Q14919 205 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 ZNF260Q3ZCT1 412 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 LEXMQ3ZCV2 418 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 OTUD1Q5VV17 481 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 FAM205BPQ63HN1 556 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 FBXO46Q6PJ61 603 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 Q6ZSV7 163 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 FASTKD5Q7L8L6 764 aaKnown RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 MIGA1Q8NAN2 632 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 POMGNT1Q8WZA1 660 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 MMABQ96EY8 250 aaPredicted RBP4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 WDFY2Q96P53 400 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 TKTL2Q9H0I9 626 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 POLR1BQ9H9Y6 1135 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 PLAC1Q9HBJ0 212 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 ADAM18Q9Y3Q7 739 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 SQORQ9Y6N5 450 aa4.42□□□□□ -1.7
SMCHD1-213ENST00000609587 A0A1W2PQF6 199 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 BECN2A8MW95 431 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 B4DGG1 531 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 VWA5AO00534 786 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 GFPT2O94808 682 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 NDUFB4O95168 129 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 IPO7O95373 1038 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 RARGP13631 454 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 HOXB2P14652 356 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 CDH2P19022 906 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 BDNFP23560 247 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 CHATP28329 748 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 RFX5P48382 616 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 POLGP54098 1239 aaPredicted RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 F2RL1P55085 397 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 ADORA2A-AS1P86434 159 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SORDQ00796 357 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SGO1Q5FBB7 561 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 FSCBQ5H9T9 825 aa4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 DNTTIP2Q5QJE6 756 aaKnown RBP4.41□□□□□ -1.7
SMCHD1-213ENST00000609587 SPATA1Q5VX52 437 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms