RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CASC4Q6P4E1 433 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 GDPD4Q6W3E5 623 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 TMEM135Q86UB9 458 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 PACS2Q86VP3 889 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 SUGP1Q8IWZ8 645 aaKnown RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 PALM2Q8IXS6 379 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 IL17RCQ8NAC3 791 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 UCMAQ8WVF2 138 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 FAM3CQ92520 227 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 RMDN1Q96DB5 314 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 IL22Q9GZX6 179 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ATP13A3Q9H7F0 1226 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 VPS37BQ9H9H4 285 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 CD248Q9HCU0 757 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 BCCIPQ9P287 314 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 PRKAG3Q9UGI9 489 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 IL36AQ9UHA7 158 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 PPM1HQ9ULR3 514 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 CA14Q9ULX7 337 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 MTF2Q9Y483 593 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-221ENST00000608903 ARL5AQ9Y689 179 aa11.62□□□□□ -0.55
CTCFL-221ENST00000608903 TCRBV9S1A1TA0A576 114 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 MROH6A6NGR9 719 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 GOLGA6L10A6NI86 522 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 SOCS5O75159 536 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 EPHX1P07099 455 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 F7P08709 466 aaPredicted RBP11.61□□□□□ -0.55
CTCFL-221ENST00000608903 ALADP13716 330 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 TIMP2P16035 220 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 COL9A1P20849 921 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 ARNTP27540 789 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 HPDP32754 393 aaPredicted RBP11.61□□□□□ -0.55
CTCFL-221ENST00000608903 MAPK8P45983 427 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 GNGT1P63211 74 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 PFKPQ01813 784 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 GUCY1A3Q02108 690 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 CCINQ13939 588 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 MLF2Q15773 248 aaPredicted RBP11.61□□□□□ -0.55
CTCFL-221ENST00000608903 TTC30BQ8N4P2 665 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 BLOC1S5Q8TDH9 187 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 FBF1Q8TES7 1133 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 ARRDC3Q96B67 414 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 TREX1Q9NSU2 369 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 MOCS1Q9NZB8 636 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 SLC17A6Q9P2U8 582 aa11.61□□□□□ -0.55
CTCFL-221ENST00000608903 NOVA2Q9UNW9 492 aaKnown RBP11.61□□□□□ -0.55
CTCFL-221ENST00000608903 FAM237BA0A1B0GVD1 139 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 A8MX80 341 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 ABHD2P08910 425 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 GLULP15104 373 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 PGAM1P18669 254 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 ADRA1DP25100 572 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 SERPINA4P29622 427 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 HNF1BP35680 557 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 RECQLP46063 649 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 ARSDP51689 593 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 EIF3BP55884 814 aaKnown RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 IFFO1Q0D2I5 559 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 FZD5Q13467 585 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 SEPT6Q14141 434 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 CRYMQ14894 314 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 PREPLQ4J6C6 727 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 AGBL2Q5U5Z8 902 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 CEP128Q6ZU80 1094 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 CHPFQ8IZ52 775 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 PNPLA1Q8N8W4 532 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 TLCD1Q96CP7 247 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 ZNF641Q96N77 438 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 RANBP9Q96S59 729 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 FAM107BQ9H098 131 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 PPIL1Q9Y3C6 166 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 A0A0J9YYE9 177 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 A0A1W2PQF6 199 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 TSPAN11A1L157 253 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 SPINT1O43278 529 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 UGT1A9O60656 530 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 KLF8O95600 359 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 TRBC1P01850 177 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 DRD1P21728 446 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 MAGOHP61326 146 aaKnown RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 GRSF1Q12849 480 aaKnown RBP eCLIP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 CAMK2GQ13555 558 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 TSTD2Q5T7W7 516 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 TSPAN33Q86UF1 283 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 OR13C4Q8NGS5 318 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 OR13J1Q8NGT2 312 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 EPS8L3Q8TE67 593 aaKnown RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 ZNF669Q96BR6 464 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 TTC25Q96NG3 672 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 GABRG3Q99928 467 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 ADGRE3Q9BY15 652 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 UGT1A7Q9HAW7 530 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 UGT1A10Q9HAW8 530 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 UGT1A8Q9HAW9 530 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 NDRG2Q9UN36 371 aaKnown RBP11.6□□□□□ -0.55
CTCFL-221ENST00000608903 SLC8A2Q9UPR5 921 aa11.6□□□□□ -0.55
CTCFL-221ENST00000608903 SORCS3Q9UPU3 1222 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms