RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TSPAN33Q86UF1 283 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 NAT8LQ8N9F0 302 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 DNAAF3Q8N9W5 541 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 SPOCK2Q92563 424 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 FAM131CQ96AQ9 280 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 PWWP2AQ96N64 755 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 MCCC1Q96RQ3 725 aaPredicted RBP7.72□□□□□ -1.17
MSH6-211ENST00000606499 WRAP53Q9BUR4 548 aaKnown RBP7.72□□□□□ -1.17
MSH6-211ENST00000606499 NEUROG2Q9H2A3 272 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 EPC1Q9H2F5 836 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 EPB41L5Q9HCM4 733 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 ITM2CQ9NQX7 267 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 B4GALT6Q9UBX8 382 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 ANAPC5Q9UJX4 755 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 FZD4Q9ULV1 537 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 TPX2Q9ULW0 747 aaKnown RBP7.72□□□□□ -1.17
MSH6-211ENST00000606499 SCML1Q9UN30 329 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 RPL26L1Q9UNX3 145 aaKnown RBP7.72□□□□□ -1.17
MSH6-211ENST00000606499 UTP11Q9Y3A2 253 aaKnown RBP7.72□□□□□ -1.17
MSH6-211ENST00000606499 ARIH1Q9Y4X5 557 aaPredicted RBP7.72□□□□□ -1.17
MSH6-211ENST00000606499 TNRC6BQ9UPQ9 1833 aaKnown RBP7.72□□□□□ -1.17
MSH6-211ENST00000606499 ZDBF2Q9HCK1 2354 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 CEP192Q8TEP8 1941 aa7.72□□□□□ -1.17
MSH6-211ENST00000606499 IGHV1OR15-9A0A0B4J2B8 117 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 A0A1W2PQ67 120 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 FAM47DPA6NHR8 397 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 GOLGA8CPA6NN73 597 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 ANKRD66B4E2M5 251 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 BHMG1C9JSJ3 638 aaPredicted RBP7.71□□□□□ -1.18
MSH6-211ENST00000606499 NEMP1O14524 444 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 AURKAO14965 403 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 AREL1O15033 823 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 AXIN1O15169 862 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 PSMD3O43242 534 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 PLRG1O43660 514 aaKnown RBP7.71□□□□□ -1.18
MSH6-211ENST00000606499 BANF1O75531 89 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 EPOP01588 193 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 IGLV3-19P01714 112 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 TPH1P17752 444 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 SESN2P58004 480 aaPredicted RBP7.71□□□□□ -1.18
MSH6-211ENST00000606499 PPP2CBP62714 309 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 POLR2LP62875 67 aaKnown RBP7.71□□□□□ -1.18
MSH6-211ENST00000606499 PPP2CAP67775 309 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CRADDP78560 199 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CDK16Q00536 496 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CDH17Q12864 832 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 RALGDSQ12967 914 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CALCOCO2Q13137 446 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 POU6F1Q14863 301 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 MORF4L2Q15014 288 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 ANGPT1Q15389 498 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 MAP7D1Q3KQU3 841 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CERCAMQ5T4B2 595 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 DENND2CQ68D51 928 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CCDC70Q6NSX1 233 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 HIBCHQ6NVY1 386 aaPredicted RBP7.71□□□□□ -1.18
MSH6-211ENST00000606499 ERAP2Q6P179 960 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CRTC1Q6UUV9 634 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 ZDHHC24Q6UX98 284 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 USP45Q70EL2 814 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 DPPA4Q7L190 304 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 PCGF5Q86SE9 256 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 LINC00523Q86TU6 105 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 KBTBD6Q86V97 674 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CAND1Q86VP6 1230 aaKnown RBP7.71□□□□□ -1.18
MSH6-211ENST00000606499 HOOK3Q86VS8 718 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 AGGF1Q8N302 714 aaeCLIP7.71□□□□□ -1.18
MSH6-211ENST00000606499 OR14C36Q8NHC7 312 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 BLOC1S5Q8TDH9 187 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 HCAR2Q8TDS4 363 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 SEC14L1Q92503 715 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 SCRN2Q96FV2 425 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 TOE1Q96GM8 510 aaKnown RBP7.71□□□□□ -1.18
MSH6-211ENST00000606499 SERPINB12Q96P63 405 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 ANKZF1Q9H8Y5 726 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 ARNT2Q9HBZ2 717 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 CASS4Q9NQ75 786 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 WHRNQ9P202 907 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 PHTF1Q9UMS5 762 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 SHOC2Q9UQ13 582 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 NCKAP1Q9Y2A7 1128 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 PPIL1Q9Y3C6 166 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 ZNF711Q9Y462 761 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 FADS3Q9Y5Q0 445 aa7.71□□□□□ -1.18
MSH6-211ENST00000606499 ZNF318Q5VUA4 2279 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 C1orf232A0A0U1RR37 186 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 CCDC78A2IDD5 438 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 SLC7A4O43246 635 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 BUD23O43709 281 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 AP1G1O43747 822 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 RNGTTO60942 597 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 ZNF217O75362 1048 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 CLDN7O95471 211 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 SEMA4FO95754 770 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 ELFN1P0C7U0 828 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 BCKDHBP21953 392 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 MGAT1P26572 445 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 HOXA6P31267 233 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 VIPR1P32241 457 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms