RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SCN8AQ9UQD0 1980 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 A0A1B0GTW7 788 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 A0A1W2PQU0 124 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 RGSL1A5PLK6 1076 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PRR23AA6NEV1 266 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PRAMEF26H0Y7S4 382 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 NDC80O14777 642 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PPFIA2O75334 1257 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 TM7SF2O76062 418 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PCDH8O95206 1070 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 AP2A1O95782 977 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PRLP01236 227 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PYGLP06737 847 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 HNRNPA2B1P22626 353 aaKnown RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PSMB4P28070 264 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 TEAD1P28347 426 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 AKT2P31751 481 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MPLP40238 635 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PTGER3P43115 390 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 DHPSP49366 369 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 GDF10P55107 478 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PDE1BQ01064 536 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 CKAP4Q07065 602 aaKnown RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SRSF5Q13243 272 aaKnown RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SEMA5AQ13591 1074 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ARHGEF7Q14155 803 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 TEAD4Q15561 434 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ZNF284Q2VY69 593 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 POM121L1PQ3SYA9 428 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PLA2G2CQ5R387 149 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 CCDC137Q6PK04 289 aaKnown RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 KDELC1Q6UW63 502 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SYT10Q6XYQ8 523 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ZNF765Q7L2R6 523 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 GSTA5Q7RTV2 222 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ZNF572Q7Z3I7 529 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ADAT2Q7Z6V5 191 aaKnown RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ZSWIM9Q86XI8 627 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 DCP2Q8IU60 420 aaKnown RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SLC41A1Q8IVJ1 513 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 TMEFF1Q8IYR6 380 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 CCDC110Q8TBZ0 833 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ERLEC1Q96DZ1 483 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 OXNAD1Q96HP4 312 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 FAM118BQ9BPY3 351 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MLPHQ9BV36 600 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SLC17A9Q9BYT1 436 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 CEP41Q9BYV8 373 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ZDHHC5Q9C0B5 715 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 RAD18Q9NS91 495 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 NCDNQ9UBB6 729 aa9.52□□□□□ -0.89
SQSTM1P1-201ENST00000603451 RALGAPA1Q6GYQ0 2036 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SMAPO00193 183 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 FANCGO15287 622 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 GJB3O75712 270 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SUN1O94901 812 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 HEXIM1O94992 359 aaKnown RBP9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 FSBPO95073 299 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ECEL1O95672 775 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MT-CYBP00156 380 aaPredicted RBP9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 IFNB1P01574 187 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PDHA1P08559 390 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 C6P13671 934 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 DEKP35659 375 aaKnown RBP9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 COILP38432 576 aaPredicted RBP9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MAGEA6P43360 314 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 WNT3AP56704 352 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 DCDC1P59894 354 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PPP2CBP62714 309 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 PPP2CAP67775 309 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 RALGDSQ12967 914 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SGCGQ13326 291 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 LAMB3Q13751 1172 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 DHX34Q14147 1143 aaKnown RBP9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SLC1A5Q15758 541 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 DUOXA1Q1HG43 343 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 ZDHHC20Q5W0Z9 365 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 KCTD11Q693B1 232 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SLC23A3Q6PIS1 610 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 RANBP10Q6VN20 620 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 LIPIQ6XZB0 460 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 NLRP8Q86W28 1048 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 NRSN1Q8IZ57 195 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 FRMD1Q8N878 549 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MFSD2AQ8NA29 543 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 TMEM145Q8NBT3 493 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 LPCAT1Q8NF37 534 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 SPATA22Q8NHS9 363 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 KIF18AQ8NI77 898 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 C1orf216Q8TAB5 229 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 DTX3LQ8TDB6 740 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MAGOHBQ96A72 148 aaKnown RBP9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 RMDN1Q96DB5 314 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MS4A14Q96JA4 679 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 MRGPRX2Q96LB1 330 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 NSMCE3Q96MG7 304 aa9.51□□□□□ -0.89
SQSTM1P1-201ENST00000603451 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms