RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ZCWPW2A0A1B0GU75 182 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 FAM47DPA6NHR8 397 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 NDST3O95803 873 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 TAC1P20366 129 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 FOXN2P32314 431 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 NPY2RP49146 381 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 BNIP1Q12981 228 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 IER5LQ5T953 404 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 TBC1D1Q86TI0 1168 aaPredicted RBP17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 TRABD2AQ86V40 505 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 RYBPQ8N488 228 aaPredicted RBP17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 WFIKKN2Q8TEU8 576 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 BRD9Q9H8M2 597 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 ELOVL2Q9NXB9 296 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 SOX13Q9UN79 622 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 TCAF1Q9Y4C2 921 aa17.45■□□□□ 0.38
PPFIA3-207ENST00000602716 POC1B-GALNT4F8VUJ3 575 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 CCL22O00626 93 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 BUD23O43709 281 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 IGSF6O95976 241 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 ASGR2P07307 311 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 DLDP09622 509 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 CCNHP51946 323 aaPredicted RBP17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 WDR4P57081 412 aaKnown RBP17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 AP1S1P61966 158 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 SULT2A1Q06520 285 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 RIPK1Q13546 671 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 SLC14A2Q15849 920 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 ITPRIPL2Q3MIP1 535 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 ANKRD20A4Q4UJ75 823 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 LIMD1Q9UGP4 676 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 COL4A2P08572 1712 aa17.44■□□□□ 0.38
PPFIA3-207ENST00000602716 TRAFD1O14545 582 aaPredicted RBP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 AURKAO14965 403 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 FZD6O60353 706 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 FAM155BO75949 473 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 HLA-EP13747 358 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 TSHRP16473 764 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 HLA-DPA1P20036 260 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 SLC8A1P32418 973 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 IL9RQ01113 521 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PTPRCAPQ14761 206 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 TXNDC11Q6PKC3 985 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 TMEM135Q86UB9 458 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 OR2A12Q8NGT7 310 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 BLOC1S5Q8TDH9 187 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 EZH1Q92800 747 aaPredicted RBP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 ERLEC1Q96DZ1 483 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 KIFC1Q9BW19 673 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 HECAQ9UBI9 543 aaPredicted RBP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PCDHB9Q9Y5E1 797 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 MIA3Q5JRA6 1907 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 TICRRQ7Z2Z1 1910 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 GOLGA8TH3BQL2 631 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PRPF4O43172 522 aaKnown RBP eCLIP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 ASMTLO95671 621 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 FGF1P05230 155 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 NQO1P15559 274 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PRKCHP24723 683 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 ARNTP27540 789 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PHBP35232 272 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 ESRP1Q6NXG1 681 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PKN3Q6P5Z2 889 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 FITM2Q8N6M3 262 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PCDH20Q8N6Y1 951 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 GRIN3AQ8TCU5 1115 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 DENND1AQ8TEH3 1009 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 ISG20Q96AZ6 181 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 GRAMD1AQ96CP6 724 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 RMDN2Q96LZ7 410 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 PAFAH2Q99487 392 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 CEP44Q9C0F1 390 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 ZDHHC6Q9H6R6 413 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 MOCS1Q9NZB8 636 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 ARL5AQ9Y689 179 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 BPTFQ12830 3046 aa17.43■□□□□ 0.38
PPFIA3-207ENST00000602716 CXorf51AA0A1B0GTR3 108 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 FAM237BA0A1B0GVD1 139 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 GSRP00390 522 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 SLC4A1P02730 911 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 ERVK-10P10266 1014 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 SLC18A1P54219 525 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 KCNJ2P63252 427 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 TFF2Q03403 129 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 CARD16Q5EG05 197 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 PCID2Q5JVF3 399 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 PPHLN1Q8NEY8 458 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 RMDN1Q96DB5 314 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 ACOX2Q99424 681 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 KCNK12Q9HB15 430 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 PRDM6Q9NQX0 595 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 FAM159BA6NKW6 160 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 WASH3PC4AMC7 463 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 LDB2O43679 373 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 SPAG6O75602 509 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 USP1O94782 785 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 KAT7O95251 611 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 PGLSO95336 258 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 EPOP01588 193 aa17.42■□□□□ 0.38
PPFIA3-207ENST00000602716 CTSLP07711 333 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms