RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 NOMO1Q15155 1222 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 ZNF423Q2M1K9 1284 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 TEX44Q53QW1 395 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 LIPIQ6XZB0 460 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 ABI3BPQ7Z7G0 1075 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 ZSCAN30Q86W11 494 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 TP53I13Q8NBR0 393 aaPredicted RBP15.29■□□□□ 0.04
LIG1-219ENST00000600055 ASB12Q8WXK4 309 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 SPOCK2Q92563 424 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 CENPTQ96BT3 561 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 PDLIM2Q96JY6 352 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 QKIQ96PU8 341 aaKnown RBP eCLIP15.29■□□□□ 0.04
LIG1-219ENST00000600055 LENG8Q96PV6 779 aaPredicted RBP15.29■□□□□ 0.04
LIG1-219ENST00000600055 RBM15Q96T37 977 aaKnown RBP eCLIP15.29■□□□□ 0.04
LIG1-219ENST00000600055 TDRD1Q9BXT4 1180 aaKnown RBP15.29■□□□□ 0.04
LIG1-219ENST00000600055 MBNL1Q9NR56 388 aaKnown RBP15.29■□□□□ 0.04
LIG1-219ENST00000600055 HAUS2Q9NVX0 235 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 PHTF1Q9UMS5 762 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 HS3ST3A1Q9Y663 406 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 A0A1W2PQ67 120 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 TCRBV7S2A1N4TA0A589 114 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 NPIPB15A6NHN6 443 aaPredicted RBP15.28■□□□□ 0.04
LIG1-219ENST00000600055 LZTS3O60299 673 aaPredicted RBP15.28■□□□□ 0.04
LIG1-219ENST00000600055 PRLP01236 227 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 PTMAP06454 111 aaKnown RBP15.28■□□□□ 0.04
LIG1-219ENST00000600055 ALPIP09923 528 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 GM2AP17900 193 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 RBL1P28749 1068 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 CD68P34810 354 aaPredicted RBP15.28■□□□□ 0.04
LIG1-219ENST00000600055 IGFALSP35858 605 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 SHBQ15464 509 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 MEI1Q5TIA1 1274 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 Q6ZSR6 202 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 PTAR1Q7Z6K3 402 aaPredicted RBP15.28■□□□□ 0.04
LIG1-219ENST00000600055 IQCHQ86VS3 1027 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 SPATA22Q8NHS9 363 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 TEKT5Q96M29 485 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 GLOD4Q9HC38 313 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 GDF3Q9NR23 364 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 TM7SF3Q9NS93 570 aa15.28■□□□□ 0.04
LIG1-219ENST00000600055 A0A1B0GTQ1 180 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 A6NNZ2 444 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 HACD1B0YJ81 288 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 F5H423 210 aaPredicted RBP15.27■□□□□ 0.04
LIG1-219ENST00000600055 FPGTO14772 594 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 TJP3O95049 919 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 ELFN1P0C7U0 828 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 LHCGRP22888 699 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 VIPR1P32241 457 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 EIF3EP60228 445 aaKnown RBP15.27■□□□□ 0.04
LIG1-219ENST00000600055 OVGP1Q12889 678 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 XRCC4Q13426 336 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 IRF4Q15306 451 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 CNGA3Q16281 694 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 WSCD2Q2TBF2 565 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 TPRG1LQ5T0D9 272 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 DENND2CQ68D51 928 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 KYAT3Q6YP21 454 aaKnown RBP15.27■□□□□ 0.04
LIG1-219ENST00000600055 DGLUCYQ7Z3D6 616 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 TSPAN33Q86UF1 283 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 ZNF567Q8N184 647 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 SLC22A18ASQ8N1D0 253 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 DEFB124Q8NES8 71 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 LPCAT1Q8NF37 534 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 HTR3CQ8WXA8 447 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 IMP4Q96G21 291 aaKnown RBP15.27■□□□□ 0.04
LIG1-219ENST00000600055 CAMK1GQ96NX5 476 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 ELF4Q99607 663 aaPredicted RBP15.27■□□□□ 0.04
LIG1-219ENST00000600055 SLC25A51Q9H1U9 297 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 PCDH9Q9HC56 1237 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
LIG1-219ENST00000600055 PPIL1Q9Y3C6 166 aa15.27■□□□□ 0.04
LIG1-219ENST00000600055 ANKRD36A6QL64 1941 aa15.27■□□□□ 0.03
LIG1-219ENST00000600055 DCHS1Q96JQ0 3298 aa15.27■□□□□ 0.03
LIG1-219ENST00000600055 TRPM6Q9BX84 2022 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 GIPC1O14908 333 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 SH3BP5O60239 455 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 MAGEC1O60732 1142 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 RECQL5O94762 991 aaPredicted RBP15.26■□□□□ 0.03
LIG1-219ENST00000600055 HEXIM1O94992 359 aaKnown RBP15.26■□□□□ 0.03
LIG1-219ENST00000600055 MT-CYBP00156 380 aaPredicted RBP15.26■□□□□ 0.03
LIG1-219ENST00000600055 ZNF883P0CG24 379 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 RBP3P10745 1247 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 CYP2A6P11509 494 aaPredicted RBP15.26■□□□□ 0.03
LIG1-219ENST00000600055 NFKB1P19838 968 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 HNF1BP35680 557 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 CCT8P50990 548 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 EPHB1P54762 984 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 BNIP3Q12983 259 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 SLC14A1Q13336 389 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 KLF1Q13351 362 aaPredicted RBP15.26■□□□□ 0.03
LIG1-219ENST00000600055 LRRC14Q15048 493 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 ACOX1Q15067 660 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 RPS6KA1Q15418 735 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 PID1Q7Z2X4 250 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 KDELC2Q7Z4H8 507 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 PIP4P1Q86T03 277 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 GATAD2AQ86YP4 633 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 DENND6BQ8NEG7 585 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms