RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 UBE2Q2Q8WVN8 375 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 CNDP2Q96KP4 475 aaKnown RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 ZNF830Q96NB3 372 aaPredicted RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 OLFM3Q96PB7 478 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 MCCC1Q96RQ3 725 aaPredicted RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 SEMA3CQ99985 751 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 GOLPH3Q9H4A6 298 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 NT5MQ9NPB1 228 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 HAUS2Q9NVX0 235 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 B4GALT6Q9UBX8 382 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 KLK13Q9UKR3 277 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 TFR2Q9UP52 801 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 COQ6Q9Y2Z9 468 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 REXO2Q9Y3B8 237 aaKnown RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 HYOU1Q9Y4L1 999 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 PCDHGC4Q9Y5F7 938 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 PCDHGA1Q9Y5H4 931 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 ADGRG1Q9Y653 693 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 RCCD1A6NED2 376 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 H3BM21 787 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 PSMD11O00231 422 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 LZTS3O60299 673 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 RECQL5O94762 991 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 LDOC1O95751 146 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 HLA-DQB2P05538 268 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ELFN1P0C7U0 828 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 CCNB1P14635 433 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ZFXP17010 805 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 LHCGRP22888 699 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 NFKBIAP25963 317 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 VIPR1P32241 457 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 CDKN2BP42772 138 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 NOP2P46087 812 aaKnown RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 MARCKSL1P49006 195 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ACADVLP49748 655 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 PEX5P50542 639 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 THOP1P52888 689 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 HNRNPKP61978 463 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 IFI35P80217 286 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 SEMG2Q02383 582 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 EIF2B5Q13144 721 aaKnown RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ZNF211Q13398 564 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 MTM1Q13496 603 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 PTK2BQ14289 1009 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 IHHQ14623 411 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 LRRC14Q15048 493 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 CNGA3Q16281 694 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 PROX2Q3B8N5 592 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ZNF542PQ5EBM4 170 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ARMC12Q5T9G4 340 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 MFSD7Q6UXD7 560 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 LIPIQ6XZB0 460 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 SPOCD1Q6ZMY3 1216 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 RFX6Q8HWS3 928 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 KATNAL2Q8IYT4 538 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 CHCHD4Q8N4Q1 142 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 RNF10Q8N5U6 811 aaKnown RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ZNF548Q8NEK5 533 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 OR4C6Q8NH72 309 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 TPCN2Q8NHX9 752 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ARRDC2Q8TBH0 407 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 PDCD6IPQ8WUM4 868 aaKnown RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 GATA6Q92908 595 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 TBATAQ96M53 351 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 IL12RB2Q99665 862 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 TDRD1Q9BXT4 1180 aaKnown RBP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 CAAP1Q9H8G2 361 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 RBM22Q9NW64 420 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 UCKL1Q9NWZ5 548 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 DNAJC28Q9NX36 388 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 SALL4Q9UJQ4 1053 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 PHTF1Q9UMS5 762 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 PPIL1Q9Y3C6 166 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 MSRB2Q9Y3D2 182 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 RAI2Q9Y5P3 530 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 ALG6Q9Y672 507 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 SCN8AQ9UQD0 1980 aa8.01□□□□□ -1.13
CHMP2A-205ENST00000600006 COL27A1Q8IZC6 1860 aaPredicted RBP8□□□□□ -1.13
CHMP2A-205ENST00000600006 hCG_1818297A0A087WSY0 165 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 NPIPB15A6NHN6 443 aaPredicted RBP8□□□□□ -1.13
CHMP2A-205ENST00000600006 KCNK1O00180 336 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 TRIM38O00635 465 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 PPP1R12AO14974 1030 aaPredicted RBP8□□□□□ -1.13
CHMP2A-205ENST00000600006 SCAMP1O15126 338 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 ZSCAN12O43309 604 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 SIGLEC6O43699 453 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 HEXIM1O94992 359 aaKnown RBP8□□□□□ -1.13
CHMP2A-205ENST00000600006 PCCBP05166 539 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 C1SP09871 688 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 CYP2A6P11509 494 aaPredicted RBP8□□□□□ -1.13
CHMP2A-205ENST00000600006 CA4P22748 312 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 CES1P23141 567 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 ACP1P24666 158 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 KIAA1024LP59773 190 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 DSC2Q02487 901 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 NIPAL4Q0D2K0 466 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 ZBTB17Q13105 803 aa8□□□□□ -1.13
CHMP2A-205ENST00000600006 NFATC4Q14934 902 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms