RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 FAM228BP0C875 321 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 ABCG1P45844 678 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 HK3P52790 923 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 UBASH3AP57075 661 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 NFATC4Q14934 902 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 BOLA3Q53S33 107 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 C6orf132Q5T0Z8 1188 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 LIPIQ6XZB0 460 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 RD3Q7Z3Z2 195 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 PELI3Q8N2H9 469 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 SNIP1Q8TAD8 396 aaKnown RBP23.02■■□□□ 1.28
CCDC61-207ENST00000599044 FGF11Q92914 225 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 TBATAQ96M53 351 aa23.02■■□□□ 1.28
CCDC61-207ENST00000599044 COL27A1Q8IZC6 1860 aaPredicted RBP23.02■■□□□ 1.28
CCDC61-207ENST00000599044 MAFKO60675 156 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 RECQL5O94762 991 aaPredicted RBP23.01■■□□□ 1.27
CCDC61-207ENST00000599044 ANXA6P08133 673 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 ZNF135P52742 658 aaPredicted RBP23.01■■□□□ 1.27
CCDC61-207ENST00000599044 SLC25A11Q02978 314 aaKnown RBP23.01■■□□□ 1.27
CCDC61-207ENST00000599044 ISXQ2M1V0 245 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 TBC1D25Q3MII6 688 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 TMCO4Q5TGY1 634 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 CPNE8Q86YQ8 564 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 LZTR1Q8N653 840 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 SYN2Q92777 582 aaPredicted RBP23.01■■□□□ 1.27
CCDC61-207ENST00000599044 PCDH18Q9HCL0 1135 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 EVA1BQ9NVM1 165 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 NCKIPSDQ9NZQ3 722 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 SEPT3Q9UH03 358 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 CAPN11Q9UMQ6 739 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 PCDHGC4Q9Y5F7 938 aa23.01■■□□□ 1.27
CCDC61-207ENST00000599044 TMEM110-MUSTN1A8MSY1 372 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 SERPING1P05155 500 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 CYP1A2P05177 515 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 CR2P20023 1033 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 IL4RP24394 825 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 ARL4AP40617 200 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 SRP54P61011 504 aaKnown RBP23■■□□□ 1.27
CCDC61-207ENST00000599044 GABREP78334 506 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 ZBED6P86452 979 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 PIGHQ14442 188 aaPredicted RBP23■■□□□ 1.27
CCDC61-207ENST00000599044 PTPRRQ15256 657 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 TMCO3Q6UWJ1 677 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 PDXPQ96GD0 296 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 ZNF599Q96NL3 588 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 NUP85Q9BW27 656 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 IFNKQ9P0W0 207 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 SIRPGQ9P1W8 387 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 PADI4Q9UM07 663 aa23■■□□□ 1.27
CCDC61-207ENST00000599044 BZW2Q9Y6E2 419 aaKnown RBP23■■□□□ 1.27
CCDC61-207ENST00000599044 PMS2P1A4D2B8 440 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 CFAP69A5D8W1 941 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 TMEM202A6NGA9 273 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 GYPCP04921 128 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 CD48P09326 243 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 ACTN2P35609 894 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 AP1S1P61966 158 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 CCDC173Q0VFZ6 552 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 MMRN1Q13201 1228 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 MTM1Q13496 603 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 DPPA4Q7L190 304 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 NIPA2Q8N8Q9 360 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 PCDH19Q8TAB3 1148 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 OR1E3Q8WZA6 343 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 ATXN7L3BQ96GX2 97 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 LGR4Q9BXB1 951 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 NOD2Q9HC29 1040 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 MRPL40Q9NQ50 206 aaKnown RBP22.99■■□□□ 1.27
CCDC61-207ENST00000599044 GULP1Q9UBP9 304 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 RABGEF1Q9UJ41 708 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 ANAPC7Q9UJX3 599 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 KALRNO60229 2985 aa22.99■■□□□ 1.27
CCDC61-207ENST00000599044 RASGRP1O95267 797 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 ELFN1P0C7U0 828 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 CTSEP14091 401 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 HTR1BP28222 390 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 RENBPP51606 427 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 MAXP61244 160 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 LRRC69Q6ZNQ3 347 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 SFTPA2Q8IWL1 248 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 FSTL5Q8N475 847 aaPredicted RBP22.98■■□□□ 1.27
CCDC61-207ENST00000599044 KYQ8NBH2 561 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 TEKT4Q8WW24 435 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 WDR92Q96MX6 357 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 CCDC3Q9BQI4 270 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 PRORYQ9H606 182 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 FGF22Q9HCT0 170 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 B4GALT6Q9UBX8 382 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 KLQ9UEF7 1012 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 ENTPD2Q9Y5L3 495 aa22.98■■□□□ 1.27
CCDC61-207ENST00000599044 RRP8O43159 456 aaKnown RBP22.97■■□□□ 1.27
CCDC61-207ENST00000599044 HTRA2O43464 458 aaPredicted RBP22.97■■□□□ 1.27
CCDC61-207ENST00000599044 LSSP48449 732 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 RPIAP49247 311 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 BLKP51451 505 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 POLR2LP62875 67 aaKnown RBP22.97■■□□□ 1.27
CCDC61-207ENST00000599044 ZNF235Q14590 738 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 ELOCQ15369 112 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 ATP13A4Q4VNC1 1196 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 PAF1Q8N7H5 531 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms