RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 COMTP21964 271 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 COL8A1P27658 744 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 ETV5P41161 510 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 CXCR3P49682 368 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 ATP11AP98196 1134 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 PIP5KL1Q5T9C9 394 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 Q6ZVU0 165 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 DAAM2Q86T65 1068 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 SYCE1Q8N0S2 351 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 SDR16C5Q8N3Y7 309 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 CCDC74AQ96AQ1 378 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 SLC39A13Q96H72 371 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 SERPINB11Q96P15 392 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 SLC12A9Q9BXP2 914 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 GOLPH3Q9H4A6 298 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 PIGVQ9NUD9 493 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 TLR6Q9Y2C9 796 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 CSNK1G3Q9Y6M4 447 aa14.08□□□□□ -0.16
SHKBP1-218ENST00000598907 POM121BA6NF01 834 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 TMEM110-MUSTN1A8MSY1 372 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 NTN3O00634 580 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 KIF5CO60282 957 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 RPLP0P05388 317 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 KRT7P08729 469 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 TNFRSF8P28908 595 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 MIPP30301 263 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 MLLT10P55197 1068 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 DEUP1Q05D60 604 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 PDE1CQ14123 709 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 TCEA2Q15560 299 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 CDO1Q16878 200 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 ZNF569Q5MCW4 686 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 TPRG1LQ5T0D9 272 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 MEI1Q5TIA1 1274 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 NUGGCQ68CJ6 796 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 CYP4V2Q6ZWL3 525 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 FRS2Q8WU20 508 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 USP7Q93009 1102 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 FCRL2Q96LA5 508 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 ALS2CR12Q96Q35 445 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 BOCQ9BWV1 1114 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 CPEB1Q9BZB8 566 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 TCEAL2Q9H3H9 227 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 DDIT4Q9NX09 232 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 SIRPGQ9P1W8 387 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 GULP1Q9UBP9 304 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 RABGEF1Q9UJ41 708 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 TUBD1Q9UJT1 453 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 PADI4Q9UM07 663 aa14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 ZFR2Q9UPR6 939 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-218ENST00000598907 SPTY2D1-AS1A0A0U1RR47 76 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 KCNU1A8MYU2 1149 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 KPNA3O00505 521 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 TCF4P15884 667 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 DESP17661 470 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 IL1R2P27930 398 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 TBX4P57082 545 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 TAS2R40P59535 323 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 CCL7P80098 99 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 PRRT3Q5FWE3 981 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 FHL5Q5TD97 284 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 LRRC38Q5VT99 294 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 UNC45BQ8IWX7 931 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 SLC35F6Q8N357 371 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 SSC4DQ8WTU2 575 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 HES6Q96HZ4 224 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 BMFQ96LC9 184 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 PEBP4Q96S96 227 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 FAM204AQ9H8W3 233 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 ARHGEF38Q9NXL2 777 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 APOBEC3BQ9UH17 382 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 AMFRQ9UKV5 643 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 PPM1HQ9ULR3 514 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 HYOU1Q9Y4L1 999 aa14.06□□□□□ -0.16
SHKBP1-218ENST00000598907 ESPNB1AK53 854 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 I6L893 689 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 RIOK3O14730 519 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 TPP1O14773 563 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 FANCGO15287 622 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 RAD51BO15315 384 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 ZNF500O60304 480 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 GCATO75600 419 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 FTCDO95954 541 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 ANXA6P08133 673 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 MSNP26038 577 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 CTNNA2P26232 953 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 PEX5P50542 639 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 AIF1P55008 147 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 GNG11P61952 73 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 ETF1P62495 437 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 NME3Q13232 169 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 MS4A13Q5J8X5 152 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 BRMS1LQ5PSV4 323 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 TXNRD3NBQ6F5E7 133 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 ESRP1Q6NXG1 681 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 PEX26Q7Z412 305 aa14.05□□□□□ -0.16
SHKBP1-218ENST00000598907 POLNQ7Z5Q5 900 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms