RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 KRT35Q92764 455 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 ZNF599Q96NL3 588 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 PSKH2Q96QS6 385 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 KRT12Q99456 494 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 CPEB1Q9BZB8 566 aaKnown RBP12.18□□□□□ -0.46
ZNF548-209ENST00000598895 SUV39H2Q9H5I1 410 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 NT5MQ9NPB1 228 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 SCUBE2Q9NQ36 999 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 TTLL3Q9Y4R7 772 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 CFAP54Q96N23 3096 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 GON4LQ3T8J9 2241 aa12.18□□□□□ -0.46
ZNF548-209ENST00000598895 WDR87Q6ZQQ6 2873 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 IGLON5A6NGN9 336 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 H0Y8X5 98 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 PGRMC1O00264 195 aaKnown RBP12.17□□□□□ -0.46
ZNF548-209ENST00000598895 MMP20O60882 483 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 FTCDO95954 541 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 PAK4O96013 591 aaPredicted RBP12.17□□□□□ -0.46
ZNF548-209ENST00000598895 TIMP2P16035 220 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 SERPINA4P29622 427 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 CCT5P48643 541 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 RENBPP51606 427 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 BCL2L1Q07817 233 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 FGL2Q14314 439 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 STAT4Q14765 748 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 PPM1JQ5JR12 505 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 SPOCD1Q6ZMY3 1216 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 MAATS1Q7Z4T9 603 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 BBS5Q8N3I7 341 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 DEFB124Q8NES8 71 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 PDCD6IPQ8WUM4 868 aaKnown RBP12.17□□□□□ -0.46
ZNF548-209ENST00000598895 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 FEM1CQ96JP0 617 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 ATP6V1G3Q96LB4 118 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 LGMNQ99538 433 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 CEP41Q9BYV8 373 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 ATP13A3Q9H7F0 1226 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 DTLQ9NZJ0 730 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 NFU1Q9UMS0 254 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 FNDC3AQ9Y2H6 1198 aaKnown RBP12.17□□□□□ -0.46
ZNF548-209ENST00000598895 COQ6Q9Y2Z9 468 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 PCDHGC4Q9Y5F7 938 aa12.17□□□□□ -0.46
ZNF548-209ENST00000598895 A0A1W2PR77 199 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 A8MX80 341 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 PRAMEF26H0Y7S4 382 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 TM4SF5O14894 197 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 GIPC1O14908 333 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 VILLO15195 856 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 RAD51BO15315 384 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 PSTPIP1O43586 416 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 TSPAN6O43657 245 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 AP1G1O43747 822 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 NEBLO76041 1014 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 CER1O95813 267 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 CDKN2BP42772 138 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 CSNK1DP48730 415 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 CARSP49589 748 aaKnown RBP12.16□□□□□ -0.46
ZNF548-209ENST00000598895 AP1S1P61966 158 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 RPS21P63220 83 aaKnown RBP12.16□□□□□ -0.46
ZNF548-209ENST00000598895 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 AP1B1Q10567 949 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 GRM3Q14832 879 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 TMEM259Q4ZIN3 620 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 SLC45A4Q5BKX6 768 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 TTMPQ5BVD1 217 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 SLC9A4Q6AI14 798 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 KIAA1161Q6NSJ0 714 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 TIGD7Q6NT04 549 aaPredicted RBP12.16□□□□□ -0.46
ZNF548-209ENST00000598895 NEK5Q6P3R8 708 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 CXorf40AQ8TE69 158 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 RAB7BQ96AH8 199 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 HAUS1Q96CS2 278 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 MS4A14Q96JA4 679 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 ZNF641Q96N77 438 aaPredicted RBP12.16□□□□□ -0.46
ZNF548-209ENST00000598895 CAMK1GQ96NX5 476 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 NAP1L3Q99457 506 aaPredicted RBP12.16□□□□□ -0.46
ZNF548-209ENST00000598895 SLC17A9Q9BYT1 436 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 ZDHHC5Q9C0B5 715 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 CAAP1Q9H8G2 361 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 NOD2Q9HC29 1040 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 PCDH12Q9NPG4 1184 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 TM7SF3Q9NS93 570 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 RBM22Q9NW64 420 aaKnown RBP eCLIP12.16□□□□□ -0.46
ZNF548-209ENST00000598895 SEPT10Q9P0V9 454 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 SAE1Q9UBE0 346 aaPredicted RBP12.16□□□□□ -0.46
ZNF548-209ENST00000598895 DMTF1Q9Y222 760 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 FAM169AQ9Y6X4 670 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
ZNF548-209ENST00000598895 LRRK1Q38SD2 2015 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 UPK3BL1B0FP48 263 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 UPK3BL2E5RIL1 263 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 KCNK1O00180 336 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 TLR4O00206 839 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 NDUFAB1O14561 156 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 AREL1O15033 823 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 MATN3O15232 486 aa12.15□□□□□ -0.46
ZNF548-209ENST00000598895 CST8O60676 142 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms