RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PCED1AQ9H1Q7 454 aa22.22■■□□□ 1.15
CHMP2A-204ENST00000597848 DUSP15Q9H1R2 295 aaPredicted RBP22.22■■□□□ 1.15
CHMP2A-204ENST00000597848 FAM86C1Q9NVL1 165 aa22.22■■□□□ 1.15
CHMP2A-204ENST00000597848 RAB23Q9ULC3 237 aa22.22■■□□□ 1.15
CHMP2A-204ENST00000597848 A0A0J9YYE9 177 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 METTL12A8MUP2 240 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 MEI4A8MW99 385 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 MMP20O60882 483 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 TRBC1P01850 177 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 MAT2AP31153 395 aaKnown RBP22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 VIPR1P32241 457 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 HNF1BP35680 557 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 MMP12P39900 470 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 PTGIRP43119 386 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 TERF1P54274 439 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 PPP2CBP62714 309 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 PPP2CAP67775 309 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 PTPRRQ15256 657 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 LPAL2Q16609 132 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 PMS2CLQ68D20 193 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 DPPA4Q7L190 304 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 TBL1YQ9BQ87 522 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 LRRC40Q9H9A6 602 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 PPIL1Q9Y3C6 166 aa22.21■■□□□ 1.15
CHMP2A-204ENST00000597848 ANKRD36A6QL64 1941 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 USP12O75317 370 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 HLA-DPA1P20036 260 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 ADRA1AP35348 466 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 CHRNA4P43681 627 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 CCR5P51681 352 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 RPS21P63220 83 aaKnown RBP22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 OLIG2Q13516 323 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 SEMA5AQ13591 1074 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 ARHGEF7Q14155 803 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 NUMA1Q14980 2115 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 SLC1A5Q15758 541 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 SIRPB2Q5JXA9 342 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 SPDYCQ5MJ68 293 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 SEL1L3Q68CR1 1132 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 KIAA1161Q6NSJ0 714 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 TRIM69Q86WT6 500 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 HORMAD1Q86X24 394 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 SLC41A1Q8IVJ1 513 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 MNS1Q8NEH6 495 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 KLK6Q92876 244 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 SLCO2A1Q92959 643 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 BIRC7Q96CA5 298 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 ZC3H10Q96K80 434 aaKnown RBP22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 MCCC1Q96RQ3 725 aaPredicted RBP22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 NEU2Q9Y3R4 380 aa22.2■■□□□ 1.14
CHMP2A-204ENST00000597848 EML5Q05BV3 1969 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 IGLON5A6NGN9 336 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 CAPN8A6NHC0 703 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 NPIPB15A6NHN6 443 aaPredicted RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 ERI2A8K979 691 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 AP2A1O95782 977 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 APRTP07741 180 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 ATXN1LP0C7T5 689 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 PIRTP0C851 137 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 ADCY8P40145 1251 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 PTGER3P43115 390 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 LIG3P49916 1009 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 SGCGQ13326 291 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 DHX34Q14147 1143 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 DENND2CQ68D51 928 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 KCTD11Q693B1 232 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 NAPEPLDQ6IQ20 393 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 RANBP10Q6VN20 620 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 SYDE1Q6ZW31 735 aaPredicted RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 ZNF572Q7Z3I7 529 aaPredicted RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 KLHDC8BQ8IXV7 354 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 RGL4Q8IZJ4 473 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 CCHCR1Q8TD31 782 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 EPC1Q9H2F5 836 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 ASIC3Q9UHC3 531 aa22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 ZFR2Q9UPR6 939 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.19■■□□□ 1.14
CHMP2A-204ENST00000597848 TTI1O43156 1089 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 LZTS3O60299 673 aaPredicted RBP22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 FGF1P05230 155 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 IGHV4-34P06331 123 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 ELFN1P0C7U0 828 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 RALGDSQ12967 914 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 PTK6Q13882 451 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 WDR45BQ5MNZ6 344 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 LYSMD4Q5XG99 296 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 CRTC1Q6UUV9 634 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 PPP1R21Q6ZMI0 780 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 LINC00523Q86TU6 105 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 TSPAN33Q86UF1 283 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 JAMLQ86YT9 394 aa22.18■■□□□ 1.14
CHMP2A-204ENST00000597848 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 A0A0U1RQS6 177 aa22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 GOLGA8CPA6NN73 597 aa22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 SLC31A1O15431 190 aa22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 TM7SF2O76062 418 aa22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 HEXIM1O94992 359 aaKnown RBP22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 MAOBP27338 520 aa22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 MRPS25P82663 173 aaKnown RBP22.17■■□□□ 1.14
CHMP2A-204ENST00000597848 ACOX1Q15067 660 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms