RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TEX33O43247 280 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 RPLP0P05388 317 aaKnown RBP12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 FERP16591 822 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 PEX5P50542 639 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 BLKP51451 505 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 NDST2P52849 883 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 AIF1P55008 147 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 UCNP55089 124 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 VAC14Q08AM6 782 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 STX1AQ16623 288 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 E4F1Q66K89 784 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 IRF2BP2Q7Z5L9 587 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 CLEC14AQ86T13 490 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 SRLQ86TD4 932 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 FSTL5Q8N475 847 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 AOPEPQ8N6M6 819 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 LSM14AQ8ND56 463 aaKnown RBP12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 DPH1Q9BZG8 443 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 SP110Q9HB58 689 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 ATXN7L1Q9ULK2 861 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
SOX2-OT-228ENST00000597828 ARHGAP42A6NI28 874 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 TOR1BO14657 336 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 PALMO75781 387 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 RECQL5O94762 991 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ALPIP09923 528 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ERCC2P18074 760 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 HTR1BP28222 390 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 SUOXP51687 545 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 RHDQ02161 417 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 MAMLD1Q13495 774 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 MTM1Q13496 603 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 AGERQ15109 404 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 TGIF1Q15583 401 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 PPP6R3Q5H9R7 873 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 AFMIDQ63HM1 303 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ERAP2Q6P179 960 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 BRAT1Q6PJG6 821 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 LIPIQ6XZB0 460 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ZNF605Q86T29 641 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 GKN2Q86XP6 184 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 Q8N9G6 341 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ANKRD20A12PQ8NF67 263 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 CCL4L1Q8NHW4 92 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ECHDC3Q96DC8 303 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ZNF641Q96N77 438 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 GFM1Q96RP9 751 aaKnown RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 RBM15Q96T37 977 aaKnown RBP eCLIP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 CINPQ9BW66 212 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 LGR4Q9BXB1 951 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ATP13A3Q9H7F0 1226 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 SUDS3Q9H7L9 328 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 ANO10Q9NW15 660 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
SOX2-OT-228ENST00000597828 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 TMEM110-MUSTN1A8MSY1 372 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 B4DGG1 531 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 K7ENP7 123 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 PLD2O14939 933 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 NOBOXO60393 691 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 TNFP01375 233 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 ITGA2BP08514 1039 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 ELFN1P0C7U0 828 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 TCF4P15884 667 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 ITIH1P19827 911 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 CDK11BP21127 795 aaKnown RBP12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 TNFAIP3P21580 790 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 SERPINA4P29622 427 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 MIPP30301 263 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 SLC5A2P31639 672 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 UGT1A5P35504 534 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 ETV5P41161 510 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 INHBCP55103 352 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 GRM3Q14832 879 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 PTPRRQ15256 657 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 ERMARDQ5T6L9 678 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 PLEKHA7Q6IQ23 1121 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 INO80CQ6PI98 192 aaPredicted RBP12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 DPPA4Q7L190 304 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 RAB11FIP2Q7L804 512 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 TMPRSS9Q7Z410 1059 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 FBXO39Q8N4B4 442 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 ARL14Q8N4G2 192 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 PAF1Q8N7H5 531 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 GPR156Q8NFN8 814 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 WDR48Q8TAF3 677 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 HCAR2Q8TDS4 363 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 GRAMD1AQ96CP6 724 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 TMEM168Q9H0V1 697 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 LRRN3Q9H3W5 708 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 MOSPD1Q9UJG1 213 aa12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
SOX2-OT-228ENST00000597828 TRAFD1O14545 582 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms