RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ATP8A1Q9Y2Q0 1164 aa10.63□□□□□ -0.71
CHMP2A-202ENST00000596708 PCDHGA7Q9Y5G6 932 aa10.63□□□□□ -0.71
CHMP2A-202ENST00000596708 ZNF462Q96JM2 2506 aa10.63□□□□□ -0.71
CHMP2A-202ENST00000596708 ARHGAP42A6NI28 874 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 EEF2KO00418 725 aaKnown RBP10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 EFSO43281 561 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 DAPK3O43293 454 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 SLC28A2O43868 658 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 PRAMEF11O60813 436 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 SERPINA4P29622 427 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 CCKBRP32239 447 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 MMP12P39900 470 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 PAPOLAP51003 745 aaKnown RBP10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 NDST2P52849 883 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 COPB1P53618 953 aaKnown RBP10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 BCL2L1Q07817 233 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 ARHGEF7Q14155 803 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 AGERQ15109 404 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 TGIF1Q15583 401 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 MON1BQ7L1V2 547 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 ZSWIM9Q86XI8 627 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 CCNJLQ8IV13 435 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 ANKRD20A12PQ8NF67 263 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 GPR156Q8NFN8 814 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 OR56A4Q8NGH8 313 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 OR1E3Q8WZA6 343 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 COL26A1Q96A83 441 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 TUBGCP5Q96RT8 1024 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 RBM15Q96T37 977 aaKnown RBP eCLIP10.62□□□□□ -0.714e-6■□□□□ 8.6
CHMP2A-202ENST00000596708 CNPY3Q9BT09 278 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 CINPQ9BW66 212 aaPredicted RBP10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 DPEP2Q9H4A9 486 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 DHX35Q9H5Z1 703 aaKnown RBP10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 LRRC19Q9H756 370 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 ATP13A3Q9H7F0 1226 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 PDFQ9HBH1 243 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 CYP4F12Q9HCS2 524 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 FANCLQ9NW38 375 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 GPATCH2LQ9NWQ4 482 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 SEPT10Q9P0V9 454 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 LRIT1Q9P2V4 623 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 SIK3Q9Y2K2 1263 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 LOXL2Q9Y4K0 774 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 DGKBQ9Y6T7 804 aa10.62□□□□□ -0.71
CHMP2A-202ENST00000596708 TCRBV5S1A1TA0A578 114 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 CFAP69A5D8W1 941 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 TMEM202A6NGA9 273 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 A8MX80 341 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 B4DGG1 531 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 DFFAO00273 331 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 TEX33O43247 280 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 RECQL5O94762 991 aaPredicted RBP10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 ELFN1P0C7U0 828 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 LIPCP11150 499 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 GLB1P16278 677 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 ITIH1P19827 911 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 KELP23276 732 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 HTR7P34969 479 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 RGRP47804 291 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 CSNK1DP48730 415 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 MAPK10P53779 464 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 KIAA1024LP59773 190 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 POLR2LP62875 67 aaKnown RBP10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 KCNC4Q03721 635 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 UBXN1Q04323 297 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 NFATC3Q12968 1075 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 ACOX1Q15067 660 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 C14orf28Q4W4Y0 310 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 MANEAQ5SRI9 462 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 CDKAL1Q5VV42 579 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 KCTD16Q68DU8 428 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 ACAD10Q6JQN1 1059 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 OGFOD3Q6PK18 319 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 LIPIQ6XZB0 460 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 PRICKLE2Q7Z3G6 844 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 MCOLN2Q8IZK6 566 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 TSEN2Q8NCE0 465 aaKnown RBP10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 FUBP1Q96AE4 644 aaKnown RBP10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 CMKLR1Q99788 373 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 FAM117AQ9C073 453 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 TMEM168Q9H0V1 697 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 SUDS3Q9H7L9 328 aaPredicted RBP10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 SP110Q9HB58 689 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 PCSK1NQ9UHG2 260 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 APPL1Q9UKG1 709 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 AP4E1Q9UPM8 1137 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 PCDHB11Q9Y5F2 797 aa10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 HEMK1Q9Y5R4 338 aaPredicted RBP10.61□□□□□ -0.71
CHMP2A-202ENST00000596708 NVLO15381 856 aaKnown RBP10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 NOBOXO60393 691 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 CCDC172P0C7W6 258 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 PNLIPP16233 465 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 ERCC2P18074 760 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 TNFAIP3P21580 790 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 PSMA2P25787 234 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 SCNN1BP51168 640 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 OGDHQ02218 1023 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 RALGDSQ12967 914 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 SRSF6Q13247 344 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms