RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 PDXPQ96GD0 296 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 TUBGCP5Q96RT8 1024 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 CCNL2Q96S94 520 aaPredicted RBP16.02■□□□□ 0.16
LINC02560-201ENST00000596379 RBM15Q96T37 977 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC02560-201ENST00000596379 STRADBQ9C0K7 418 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 DONSONQ9NYP3 566 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 LIMA1Q9UHB6 759 aaKnown RBP16.02■□□□□ 0.16
LINC02560-201ENST00000596379 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.16
LINC02560-201ENST00000596379 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 TMEM202A6NGA9 273 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 ARHGAP42A6NI28 874 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 LGALS16A8MUM7 142 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 EEF2KO00418 725 aaKnown RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 EFSO43281 561 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 PALMO75781 387 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 RECQL5O94762 991 aaPredicted RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 HGFP14210 728 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 SERPINA4P29622 427 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 HTR7P34969 479 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 RALGDSQ12967 914 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 EIF3IQ13347 325 aaKnown RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 CA9Q16790 459 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 TAF8Q7Z7C8 310 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 JAMLQ86YT9 394 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 Q8N9G6 341 aaPredicted RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 ANKRD20A12PQ8NF67 263 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 OR1E3Q8WZA6 343 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 FUBP1Q96AE4 644 aaKnown RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 DHX35Q9H5Z1 703 aaKnown RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 ATP13A3Q9H7F0 1226 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 MRPL40Q9NQ50 206 aaKnown RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 AP4E1Q9UPM8 1137 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 PCDHGA7Q9Y5G6 932 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 ARHGEF17Q96PE2 2063 aaPredicted RBP16.01■□□□□ 0.15
LINC02560-201ENST00000596379 AHCTF1Q8WYP5 2266 aa16.01■□□□□ 0.15
LINC02560-201ENST00000596379 SCN8AQ9UQD0 1980 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 B8ZZF3 427 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 CACNB4O00305 520 aaPredicted RBP16■□□□□ 0.15
LINC02560-201ENST00000596379 DESP17661 470 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
LINC02560-201ENST00000596379 CCKBRP32239 447 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 BCL2L1Q07817 233 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 ERMARDQ5T6L9 678 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 OGFOD3Q6PK18 319 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 LIPIQ6XZB0 460 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 CCNJLQ8IV13 435 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 SFTPA2Q8IWL1 248 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 FAM46DQ8NEK8 389 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 OR56A4Q8NGH8 313 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 MED8Q96G25 268 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 TMEM74Q96NL1 305 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 FGF22Q9HCT0 170 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 TAS2R14Q9NYV8 317 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 PCSK1NQ9UHG2 260 aa16■□□□□ 0.15
LINC02560-201ENST00000596379 ATXN7L1Q9ULK2 861 aaPredicted RBP16■□□□□ 0.15
LINC02560-201ENST00000596379 LRRC10BA6NIK2 292 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 A8MX80 341 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 AGRPO00253 132 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 DAPK3O43293 454 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 NOBOXO60393 691 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 ELFN1P0C7U0 828 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 KRT10P13645 584 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 GLB1P16278 677 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 FERP16591 822 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 TNFAIP3P21580 790 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 PSMA2P25787 234 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 KIAA1024LP59773 190 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 POLR2LP62875 67 aaKnown RBP15.99■□□□□ 0.15
LINC02560-201ENST00000596379 NSUN2Q08J23 767 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC02560-201ENST00000596379 MAMLD1Q13495 774 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 TGIF1Q15583 401 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 AFMIDQ63HM1 303 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 ARHGAP36Q6ZRI8 547 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
LINC02560-201ENST00000596379 ARFGAP1Q8N6T3 406 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 PAF1Q8N7H5 531 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 ECHDC3Q96DC8 303 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 KCTD15Q96SI1 283 aaPredicted RBP15.99■□□□□ 0.15
LINC02560-201ENST00000596379 CINPQ9BW66 212 aaPredicted RBP15.99■□□□□ 0.15
LINC02560-201ENST00000596379 LGR4Q9BXB1 951 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 TMEM168Q9H0V1 697 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 PISDQ9UG56 409 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 MOSPD1Q9UJG1 213 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 APPL1Q9UKG1 709 aa15.99■□□□□ 0.15
LINC02560-201ENST00000596379 TMCO5BA8MYB1 307 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 DFFAO00273 331 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 TNFRSF10CO14798 259 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 HOXC4P09017 264 aaPredicted RBP15.98■□□□□ 0.15
LINC02560-201ENST00000596379 CCDC172P0C7W6 258 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 JMJD7P0C870 316 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 GM2AP17900 193 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 ERCC2P18074 760 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 KELP23276 732 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 TRIM23P36406 574 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 SCNN1BP51168 640 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 CERCAMQ5T4B2 595 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 RFX8Q6ZV50 586 aa15.98■□□□□ 0.15
LINC02560-201ENST00000596379 DPPA4Q7L190 304 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms