RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 INTS6Q9UL03 887 aaKnown RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 HBS1LQ9Y450 684 aaKnown RBP13.02□□□□□ -0.33
SCAF1-202ENST00000595242 ABCA12Q86UK0 2595 aa13.02□□□□□ -0.33
SCAF1-202ENST00000595242 BLACEA4D250 179 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 C3orf70A6NLC5 250 aaPredicted RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 SLC7A4O43246 635 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 RNGTTO60942 597 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 TCEA3O75764 348 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 LATS1O95835 1130 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 SRPRAP08240 638 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 SLC5A2P31639 672 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 GGCXP38435 758 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 ZNF143P52747 638 aaPredicted RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 METAP1P53582 386 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 FOXK1P85037 733 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 BST2Q10589 180 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 HADHQ16836 314 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 CFAP58Q5T655 872 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 GUSBP11Q6P575 273 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 CRTC1Q6UUV9 634 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 EFL1Q7Z2Z2 1120 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 TMC3Q7Z5M5 1100 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 C14orf80Q86SX3 495 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 PTRH1Q86Y79 214 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 CCDC50Q8IVM0 306 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 ANKRD52Q8NB46 1076 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 TMEM145Q8NBT3 493 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 PTPRN2Q92932 1015 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 FAM131CQ96AQ9 280 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 MYOCQ99972 504 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 NCAPGQ9BPX3 1015 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 CNPY3Q9BT09 278 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 CALN1Q9BXU9 219 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 FRMD8P1Q9BZ68 369 aaPredicted RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 DPH5Q9H2P9 285 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 SYNCQ9H7C4 482 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 LRRC4CQ9HCJ2 640 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 ASNSD1Q9NWL6 643 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 GEMIN8Q9NWZ8 242 aaKnown RBP13.01□□□□□ -0.33
SCAF1-202ENST00000595242 WHRNQ9P202 907 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 HESX1Q9UBX0 185 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 NEU2Q9Y3R4 380 aa13.01□□□□□ -0.33
SCAF1-202ENST00000595242 CCDC187A0A096LP49 1063 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 GOLGA6L7A0A1B0GV03 622 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 GOLGA8KD6RF30 607 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 E5RJQ4 531 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 ENDOD1O94919 500 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 GPD1P21695 349 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 SLC6A4P31645 630 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 CDKN2BP42772 138 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 RPL21P46778 160 aaKnown RBP13□□□□□ -0.33
SCAF1-202ENST00000595242 ELAVL3Q14576 367 aaKnown RBP13□□□□□ -0.33
SCAF1-202ENST00000595242 TERF2Q15554 542 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 SKIDA1Q1XH10 827 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 ZNF542PQ5EBM4 170 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 TFDP3Q5H9I0 405 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 RAB41Q5JT25 222 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 FAM102AQ5T9C2 384 aaPredicted RBP13□□□□□ -0.33
SCAF1-202ENST00000595242 HIST2H2BCQ6DN03 193 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 ZCCHC8Q6NZY4 707 aaKnown RBP13□□□□□ -0.33
SCAF1-202ENST00000595242 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 PIGZQ86VD9 579 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 VSIG1Q86XK7 387 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 ATL2Q8NHH9 583 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 RNF139Q8WU17 664 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 NDRG1Q92597 394 aaKnown RBP13□□□□□ -0.33
SCAF1-202ENST00000595242 ART4Q93070 314 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 ZIM3Q96PE6 472 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 FMO2Q99518 471 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 NCKIPSDQ9NZQ3 722 aa13□□□□□ -0.33
SCAF1-202ENST00000595242 CASC3O15234 703 aaKnown RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 SLC31A1O15431 190 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 IRAK2O43187 625 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 MSI1O43347 362 aaKnown RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 GABBR2O75899 941 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 TJP3O95049 919 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 GAS8O95995 478 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 ZBED1O96006 694 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 IVDP26440 423 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 IL1R2P27930 398 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 ACADSBP45954 432 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 CCR10P46092 362 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 TKTL1P51854 596 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 CYP4F2P78329 520 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 ECT2LQ008S8 904 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 SLC6A3Q01959 620 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 CLCA4Q14CN2 919 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 UAP1Q16222 522 aaPredicted RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 ATP13A4Q4VNC1 1196 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 FAM133BQ5BKY9 247 aaKnown RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 FSCBQ5H9T9 825 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 PITRM1Q5JRX3 1037 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 CRYBG3Q68DQ2 2970 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms