RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 MTM1Q13496 603 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 NFATC4Q14934 902 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 NR0B2Q15466 257 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 MARC1Q5VT66 337 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 CDCP2Q5VXM1 449 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 H2AFVQ71UI9 128 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 DPPA4Q7L190 304 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 HID1Q8IV36 788 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 PGBD5Q8N414 524 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 ATL2Q8NHH9 583 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 FAM71BQ8TC56 605 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 TSACCQ96A04 125 aaPredicted RBP23.59■■□□□ 1.37
LSM4-204ENST00000594828 BOCQ9BWV1 1114 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 CLPBQ9H078 707 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 LRRK1Q38SD2 2015 aa23.59■■□□□ 1.37
LSM4-204ENST00000594828 EME2A4GXA9 379 aaPredicted RBP23.58■■□□□ 1.37
LSM4-204ENST00000594828 SOCS5O75159 536 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 RASGRP1O95267 797 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 CD48P09326 243 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 CTSEP14091 401 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 MMP13P45452 471 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 RPIAP49247 311 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 SLC18A3Q16572 532 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 ALG11Q2TAA5 492 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 ATP13A4Q4VNC1 1196 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 C6orf132Q5T0Z8 1188 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 SPECC1LQ69YQ0 1117 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 EFL1Q7Z2Z2 1120 aaKnown RBP23.58■■□□□ 1.37
LSM4-204ENST00000594828 RD3Q7Z3Z2 195 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 LRRC49Q8IUZ0 686 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 FSTL5Q8N475 847 aaPredicted RBP23.58■■□□□ 1.37
LSM4-204ENST00000594828 PLA2G15Q8NCC3 412 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 OR8K1Q8NGG5 319 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 MAPK15Q8TD08 544 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 PDCD6IPQ8WUM4 868 aaKnown RBP23.58■■□□□ 1.37
LSM4-204ENST00000594828 CTNNBL1Q8WYA6 563 aaPredicted RBP23.58■■□□□ 1.37
LSM4-204ENST00000594828 SPOCK2Q92563 424 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 DEPDC7Q96QD5 511 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 MGME1Q9BQP7 344 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 NOD2Q9HC29 1040 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 UVRAGQ9P2Y5 699 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 DOLKQ9UPQ8 538 aa23.58■■□□□ 1.37
LSM4-204ENST00000594828 ANKRD36A6QL64 1941 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 HTRA2O43464 458 aaPredicted RBP23.57■■□□□ 1.36
LSM4-204ENST00000594828 PROSCO94903 275 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 GJC1P36383 396 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 ARSEP51690 589 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 SRP54P61011 504 aaKnown RBP23.57■■□□□ 1.36
LSM4-204ENST00000594828 MAXP61244 160 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 TRIM14Q14142 442 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 ELOCQ15369 112 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 COL28A1Q2UY09 1125 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 GUSBP11Q6P575 273 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 KCTD6Q8NC69 237 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 SCG3Q8WXD2 468 aaKnown RBP23.57■■□□□ 1.36
LSM4-204ENST00000594828 WDR92Q96MX6 357 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 DEF6Q9H4E7 631 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 ZNHIT6Q9NWK9 470 aaKnown RBP23.57■■□□□ 1.36
LSM4-204ENST00000594828 B4GALT6Q9UBX8 382 aa23.57■■□□□ 1.36
LSM4-204ENST00000594828 A0A087WV48 116 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 ALPIP09923 528 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 NFKBIAP25963 317 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 DPYSL3Q14195 570 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 ACOX1Q15067 660 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 RALGPS1Q5JS13 557 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 ESRP1Q6NXG1 681 aaKnown RBP23.56■■□□□ 1.36
LSM4-204ENST00000594828 CPNE8Q86YQ8 564 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 SLC35F3Q8IY50 421 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 DCBLD2Q96PD2 775 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 DNAJC7Q99615 494 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 PACSIN1Q9BY11 444 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 KLQ9UEF7 1012 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 PHTF1Q9UMS5 762 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 PCDHB1Q9Y5F3 818 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 ADAMTS20P59510 1910 aa23.56■■□□□ 1.36
LSM4-204ENST00000594828 CACNB4O00305 520 aaPredicted RBP23.55■■□□□ 1.36
LSM4-204ENST00000594828 CPP00450 1065 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 TNFP01375 233 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 CELA2BP08218 269 aaPredicted RBP23.55■■□□□ 1.36
LSM4-204ENST00000594828 TGM2P21980 687 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 PDK2Q15119 407 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 TSR1Q2NL82 804 aaKnown RBP23.55■■□□□ 1.36
LSM4-204ENST00000594828 ASTE1Q2TB18 679 aaPredicted RBP23.55■■□□□ 1.36
LSM4-204ENST00000594828 ANKRD20A8PQ5CZ79 823 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 LVRNQ6Q4G3 990 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 MAP7D3Q8IWC1 876 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 SDR16C5Q8N3Y7 309 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 TPCN2Q8NHX9 752 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 PCDH19Q8TAB3 1148 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 FUBP1Q96AE4 644 aaKnown RBP23.55■■□□□ 1.36
LSM4-204ENST00000594828 NT5MQ9NPB1 228 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 LCMT1Q9UIC8 334 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 CHD6Q8TD26 2715 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 PKD1L2Q7Z442 2459 aa23.55■■□□□ 1.36
LSM4-204ENST00000594828 SSU72P8A0A1W2PR75 194 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 MFSD11O43934 449 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 AKR1B10O60218 316 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 BRINP1O60477 761 aa23.54■■□□□ 1.36
LSM4-204ENST00000594828 CSO75390 466 aaKnown RBP23.54■■□□□ 1.36
LSM4-204ENST00000594828 KRT7P08729 469 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms