RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PTAR1Q7Z6K3 402 aaPredicted RBP14.64□□□□□ -0.07
VRK3-206ENST00000594090 OR13H1Q8NG92 308 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 AGAP3Q96P47 875 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 QKIQ96PU8 341 aaKnown RBP eCLIP14.64□□□□□ -0.07
VRK3-206ENST00000594090 ELF4Q99607 663 aaPredicted RBP14.64□□□□□ -0.07
VRK3-206ENST00000594090 TDRD1Q9BXT4 1180 aaKnown RBP14.64□□□□□ -0.07
VRK3-206ENST00000594090 ERVMER34-1Q9H9K5 563 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 LZTFL1Q9NQ48 299 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 B4GALT6Q9UBX8 382 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 PHTF1Q9UMS5 762 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 A0A1B0GTQ1 180 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 CFAP69A5D8W1 941 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 HACD1B0YJ81 288 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 FPGTO14772 594 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 FZD6O60353 706 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 DFNA5O60443 496 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 MMP2P08253 660 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 PDHA1P08559 390 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 ELFN1P0C7U0 828 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 CA4P22748 312 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 PTPN3P26045 913 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 VIPR1P32241 457 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 CD86P42081 329 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 TEX44Q53QW1 395 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 LIPIQ6XZB0 460 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 PIP4P1Q86T03 277 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 SLC22A18ASQ8N1D0 253 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 OXR1Q8N573 874 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 TP53I13Q8NBR0 393 aaPredicted RBP14.63□□□□□ -0.07
VRK3-206ENST00000594090 PIH1D2Q8WWB5 315 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 CENPTQ96BT3 561 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 GPR27Q9NS67 375 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 PPP2R2CQ9Y2T4 447 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 PCDHGB2Q9Y5G2 931 aa14.63□□□□□ -0.07
VRK3-206ENST00000594090 ASCC3Q8N3C0 2202 aaKnown RBP14.62□□□□□ -0.07
VRK3-206ENST00000594090 NPIPB15A6NHN6 443 aaPredicted RBP14.62□□□□□ -0.07
VRK3-206ENST00000594090 A8MX80 341 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 MTSS1O43312 755 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 LZTS3O60299 673 aaPredicted RBP14.62□□□□□ -0.07
VRK3-206ENST00000594090 TJP3O95049 919 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 CYP2A6P11509 494 aaPredicted RBP14.62□□□□□ -0.07
VRK3-206ENST00000594090 CSRP1P21291 193 aaKnown RBP14.62□□□□□ -0.07
VRK3-206ENST00000594090 NFKBIAP25963 317 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 RABIFP47224 123 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 SKOR1P84550 965 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 IL9RQ01113 521 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 OTUD4Q01804 1114 aaKnown RBP14.62□□□□□ -0.07
VRK3-206ENST00000594090 WASHC5Q12768 1159 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 XRCC4Q13426 336 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 AGERQ15109 404 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 IRF4Q15306 451 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 PPM1JQ5JR12 505 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 PRAMEF14Q5SWL7 426 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 KDM7AQ6ZMT4 941 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 Q6ZSR6 202 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 USP45Q70EL2 814 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 NAXDQ8IW45 347 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 DEFB124Q8NES8 71 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 ACTL9Q8TC94 416 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 UBE2Q2Q8WVN8 375 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 MCCC1Q96RQ3 725 aaPredicted RBP14.62□□□□□ -0.07
VRK3-206ENST00000594090 CHKBQ9Y259 395 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 PPIL1Q9Y3C6 166 aa14.62□□□□□ -0.07
VRK3-206ENST00000594090 H7C0C1 242 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 YKT6O15498 198 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 PCDHGA12O60330 932 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 PRLP01236 227 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 CTPS1P17812 591 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 GM2AP17900 193 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 ATP5OP48047 213 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 RXRGP48443 463 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 NOVA1P51513 510 aaKnown RBP14.61□□□□□ -0.07
VRK3-206ENST00000594090 EPHB1P54762 984 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 PFN3P60673 137 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 LRRC14Q15048 493 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 SHBQ15464 509 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 CNGA3Q16281 694 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 PSAPL1Q6NUJ1 521 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 DBX2Q6ZNG2 339 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 ERMP1Q7Z2K6 904 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 DCP2Q8IU60 420 aaKnown RBP14.61□□□□□ -0.07
VRK3-206ENST00000594090 HTR3CQ8WXA8 447 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 ANP32BQ92688 251 aaKnown RBP14.61□□□□□ -0.07
VRK3-206ENST00000594090 TADA1Q96BN2 335 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 SCRN2Q96FV2 425 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 IMP4Q96G21 291 aaKnown RBP14.61□□□□□ -0.07
VRK3-206ENST00000594090 TEKT5Q96M29 485 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 ALS2CR12Q96Q35 445 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 RBM15Q96T37 977 aaKnown RBP eCLIP14.61□□□□□ -0.07
VRK3-206ENST00000594090 SLC25A51Q9H1U9 297 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 GLOD4Q9HC38 313 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 PCDH9Q9HC56 1237 aa14.61□□□□□ -0.07
VRK3-206ENST00000594090 MBNL1Q9NR56 388 aaKnown RBP14.61□□□□□ -0.07
VRK3-206ENST00000594090 A0A0J9YYE9 177 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 GIPC1O14908 333 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 FLRT2O43155 660 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 SH3BP5O60239 455 aa14.6□□□□□ -0.07
VRK3-206ENST00000594090 RECQL5O94762 991 aaPredicted RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 HEXIM1O94992 359 aaKnown RBP14.6□□□□□ -0.07
VRK3-206ENST00000594090 KCNK5O95279 499 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms