RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 HERPUD2Q9BSE4 406 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 POLR1EQ9GZS1 481 aaKnown RBP19.78■□□□□ 0.76
LSM4-203ENST00000593829 RABEP2Q9H5N1 569 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 VPS45Q9NRW7 570 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 TMEM74BQ9NUR3 256 aa19.78■□□□□ 0.76
LSM4-203ENST00000593829 TPX2Q9ULW0 747 aaKnown RBP19.78■□□□□ 0.76
LSM4-203ENST00000593829 OTOGLQ3ZCN5 2332 aa19.77■□□□□ 0.76
LSM4-203ENST00000593829 TTC24A2A3L6 582 aaPredicted RBP19.77■□□□□ 0.76
LSM4-203ENST00000593829 IGHV4-34P06331 123 aa19.77■□□□□ 0.76
LSM4-203ENST00000593829 MYZAPP0CAP1 466 aa19.77■□□□□ 0.76
LSM4-203ENST00000593829 IFI35P80217 286 aaPredicted RBP19.77■□□□□ 0.76
LSM4-203ENST00000593829 CCDC6Q16204 474 aa19.77■□□□□ 0.76
LSM4-203ENST00000593829 TTC7BQ86TV6 843 aa19.77■□□□□ 0.76
LSM4-203ENST00000593829 NOD2Q9HC29 1040 aa19.77■□□□□ 0.76
LSM4-203ENST00000593829 SEMA4GQ9NTN9 838 aa19.77■□□□□ 0.76
LSM4-203ENST00000593829 C10orf142B7Z368 130 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 CES1P23141 567 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 HSD17B3P37058 310 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 MNAT1P51948 309 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 PRKD1Q15139 912 aaPredicted RBP19.76■□□□□ 0.75
LSM4-203ENST00000593829 CSRP2Q16527 193 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 CEP85LQ5SZL2 805 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 PEAR1Q5VY43 1037 aaPredicted RBP19.76■□□□□ 0.75
LSM4-203ENST00000593829 NEK5Q6P3R8 708 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 BRAT1Q6PJG6 821 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 ZC3H18Q86VM9 953 aaKnown RBP19.76■□□□□ 0.75
LSM4-203ENST00000593829 TAX1BP1Q86VP1 789 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 IL12RB2Q99665 862 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 MIR1-1HGQ9H1L0 117 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 SEPT10Q9P0V9 454 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 SUSD2Q9UGT4 822 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 EIF2B4Q9UI10 523 aaKnown RBP19.76■□□□□ 0.75
LSM4-203ENST00000593829 TTLL3Q9Y4R7 772 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 FADS3Q9Y5Q0 445 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 WDR87Q6ZQQ6 2873 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 TSPAN11A1L157 253 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 C5orf60A6NFR6 353 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 AP1G1O43747 822 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 ZNF806P0C7X5 589 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 GNSP15586 552 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 CD27P26842 260 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 ALG1LQ6GMV1 187 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 RABEPKQ7Z6M1 372 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 TRIM69Q86WT6 500 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 RASGEF1CQ8N431 466 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 SEC14L1Q92503 715 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 SEMA3CQ99985 751 aa19.76■□□□□ 0.75
LSM4-203ENST00000593829 TNRC6BQ9UPQ9 1833 aaKnown RBP19.75■□□□□ 0.75
LSM4-203ENST00000593829 HACD1B0YJ81 288 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 H0YHG0 523 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 PCDH8O95206 1070 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 HLA-DQB2P05538 268 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 TIMP2P16035 220 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 TGM1P22735 817 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 XPAP23025 273 aaPredicted RBP19.75■□□□□ 0.75
LSM4-203ENST00000593829 SUOXP51687 545 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 PPP2CBP62714 309 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 PPP2CAP67775 309 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 ZBTB17Q13105 803 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 XRCC4Q13426 336 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 NOMO1Q15155 1222 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 MAATS1Q7Z4T9 603 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 PAF1Q8N7H5 531 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 CEP76Q8TAP6 659 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 ACTL9Q8TC94 416 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 NSMCE3Q96MG7 304 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 PARD6AQ9NPB6 346 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 ATP8A1Q9Y2Q0 1164 aa19.75■□□□□ 0.75
LSM4-203ENST00000593829 GMNCA6NCL1 334 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 NEMP1O14524 444 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 TRAFD1O14545 582 aaPredicted RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 MTSS1O43312 755 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 LATO43561 262 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 RNGTTO60942 597 aaKnown RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 SOCS5O75159 536 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 RASSF9O75901 435 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 ABL2P42684 1182 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 OTUD4Q01804 1114 aaKnown RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 UGP2Q16851 508 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 DUOXA1Q1HG43 343 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 SEL1L2Q5TEA6 688 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 PRPF39Q86UA1 669 aaKnown RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 ECHDC3Q96DC8 303 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 SMOC1Q9H4F8 434 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 PCDHGC4Q9Y5F7 938 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 A0A1W2PPC4 97 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 PGRMC1O00264 195 aaKnown RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 AREL1O15033 823 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 TSPAN6O43657 245 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 FOXD2O60548 495 aaPredicted RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 POLR2LP62875 67 aaKnown RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 UAP1Q16222 522 aaPredicted RBP19.74■□□□□ 0.75
LSM4-203ENST00000593829 HORMAD1Q86X24 394 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.74■□□□□ 0.75
LSM4-203ENST00000593829 CNTD1Q8N815 330 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 C1orf216Q8TAB5 229 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 FEM1CQ96JP0 617 aa19.74■□□□□ 0.75
LSM4-203ENST00000593829 QKIQ96PU8 341 aaKnown RBP eCLIP19.74■□□□□ 0.75
LSM4-203ENST00000593829 A0A1B0GTW7 788 aa19.73■□□□□ 0.75
LSM4-203ENST00000593829 A0A1W2PQ67 120 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms