RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PRKCGP05129 697 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 FERP16591 822 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 CDK11BP21127 795 aaKnown RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 PAPOLAP51003 745 aaKnown RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 INHBCP55103 352 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 CCL7P80098 99 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 PPP1R2P3Q6NXS1 205 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 RAB11FIP2Q7L804 512 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 B3GNT8Q7Z7M8 397 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 SRLQ86TD4 932 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 ZSWIM9Q86XI8 627 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 TSEN2Q8NCE0 465 aaKnown RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 TTC9Q92623 222 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 ERGIC2Q96RQ1 377 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 RBM15Q96T37 977 aaKnown RBP eCLIP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 EIF3CQ99613 913 aaKnown RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 SLC39A8Q9C0K1 460 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 DHX35Q9H5Z1 703 aaKnown RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 SP110Q9HB58 689 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 GPATCH2LQ9NWQ4 482 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 DGKBQ9Y6T7 804 aa22.79■■□□□ 1.24
SSBP4-203ENST00000593641 CFAP69A5D8W1 941 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 DAPK3O43293 454 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 ELFN1P0C7U0 828 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 KELP23276 732 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 PSMA2P25787 234 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 CSNK1DP48730 415 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 OGDHQ02218 1023 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 LY6DQ14210 128 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 SASS6Q6UVJ0 657 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 JAMLQ86YT9 394 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 OR56A4Q8NGH8 313 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 TMEM74Q96NL1 305 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 FOXP3Q9BZS1 431 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 LRRN3Q9H3W5 708 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 LMBRD1Q9NUN5 540 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 ANO10Q9NW15 660 aa22.78■■□□□ 1.24
SSBP4-203ENST00000593641 A0A1W2PQM1 296 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 RGRP47804 291 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 KIAA1024LP59773 190 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 POLR2LP62875 67 aaKnown RBP22.77■■□□□ 1.24
SSBP4-203ENST00000593641 BCL2L1Q07817 233 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 KIAA1614Q5VZ46 1190 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 RBM43Q6ZSC3 357 aaKnown RBP22.77■■□□□ 1.24
SSBP4-203ENST00000593641 TAF8Q7Z7C8 310 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 CCNJLQ8IV13 435 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 PLA2G15Q8NCC3 412 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 CCNL2Q96S94 520 aaPredicted RBP22.77■■□□□ 1.24
SSBP4-203ENST00000593641 PARVAQ9NVD7 372 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 PCDHGA7Q9Y5G6 932 aa22.77■■□□□ 1.24
SSBP4-203ENST00000593641 J3QKU1 62 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 RECQL5O94762 991 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-203ENST00000593641 JMJD7P0C870 316 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 TNFAIP3P21580 790 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 CCKBRP32239 447 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 UGT1A5P35504 534 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 RALGDSQ12967 914 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 RFTN1Q14699 578 aaPredicted RBP22.76■■□□□ 1.23
SSBP4-203ENST00000593641 ERMARDQ5T6L9 678 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 RFX8Q6ZV50 586 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 NYAP1Q6ZVC0 841 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 GPR156Q8NFN8 814 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 ECHDC3Q96DC8 303 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 SEMA4CQ9C0C4 833 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 PCSK1NQ9UHG2 260 aa22.76■■□□□ 1.23
SSBP4-203ENST00000593641 TMEM202A6NGA9 273 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 DFFAO00273 331 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 RNF8O76064 485 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 GLB1P16278 677 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 SLC5A2P31639 672 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 MAMLD1Q13495 774 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 STX1AQ16623 288 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 CA9Q16790 459 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 LIPIQ6XZB0 460 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 Q8N9G6 341 aaPredicted RBP22.75■■□□□ 1.23
SSBP4-203ENST00000593641 FAM46DQ8NEK8 389 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 OR1E3Q8WZA6 343 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 FUBP1Q96AE4 644 aaKnown RBP22.75■■□□□ 1.23
SSBP4-203ENST00000593641 SNRNP25Q9BV90 132 aaKnown RBP22.75■■□□□ 1.23
SSBP4-203ENST00000593641 WDR26Q9H7D7 661 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 FGF22Q9HCT0 170 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 TAS2R14Q9NYV8 317 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 APPL1Q9UKG1 709 aa22.75■■□□□ 1.23
SSBP4-203ENST00000593641 ATXN7L1Q9ULK2 861 aaPredicted RBP22.75■■□□□ 1.23
SSBP4-203ENST00000593641 LRRC10BA6NIK2 292 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 TMCO5BA8MYB1 307 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 ATMINO43313 823 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-203ENST00000593641 HGFP14210 728 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 ERCC2P18074 760 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 IL10RBQ08334 325 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 NSUN2Q08J23 767 aaKnown RBP eCLIP22.74■■□□□ 1.23
SSBP4-203ENST00000593641 PPP6R3Q5H9R7 873 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-203ENST00000593641 CERCAMQ5T4B2 595 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 KCTD16Q68DU8 428 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 DPPA4Q7L190 304 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 MED8Q96G25 268 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 KCTD15Q96SI1 283 aaPredicted RBP22.74■■□□□ 1.23
SSBP4-203ENST00000593641 DPEP2Q9H4A9 486 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 MRPL40Q9NQ50 206 aaKnown RBP22.74■■□□□ 1.23
SSBP4-203ENST00000593641 PISDQ9UG56 409 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms