RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RALGDSQ12967 914 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 EIF3IQ13347 325 aaKnown RBP24.06■■□□□ 1.44
LSM4-202ENST00000593564 NCAPHQ15003 741 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 TCEA2Q15560 299 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 ERMARDQ5T6L9 678 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 PLEKHA7Q6IQ23 1121 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 NYAP1Q6ZVC0 841 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 ZNF605Q86T29 641 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 ARFGAP1Q8N6T3 406 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 PDXPQ96GD0 296 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 CINPQ9BW66 212 aaPredicted RBP24.06■■□□□ 1.44
LSM4-202ENST00000593564 MYO6Q9UM54 1294 aa24.06■■□□□ 1.44
LSM4-202ENST00000593564 D6RAR5 112 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 TMX2-CTNND1H3BSU7 103 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 TNFP01375 233 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 PLA2G2AP14555 144 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 TNFAIP3P21580 790 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 KIAA1024LP59773 190 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 NSUN2Q08J23 767 aaKnown RBP eCLIP24.05■■□□□ 1.44
LSM4-202ENST00000593564 RFTN1Q14699 578 aaPredicted RBP24.05■■□□□ 1.44
LSM4-202ENST00000593564 RFX8Q6ZV50 586 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 B3GNT8Q7Z7M8 397 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 ARHGAP12Q8IWW6 846 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 PLA2G15Q8NCC3 412 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 GFM1Q96RP9 751 aaKnown RBP24.05■■□□□ 1.44
LSM4-202ENST00000593564 PEBP4Q96S96 227 aa24.05■■□□□ 1.44
LSM4-202ENST00000593564 KCTD15Q96SI1 283 aaPredicted RBP24.05■■□□□ 1.44
LSM4-202ENST00000593564 SNRNP25Q9BV90 132 aaKnown RBP24.05■■□□□ 1.44
LSM4-202ENST00000593564 FLNBO75369 2602 aaKnown RBP24.05■■□□□ 1.44
LSM4-202ENST00000593564 COL6A6A6NMZ7 2263 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 LRP4O75096 1905 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 A0A1W2PQM1 296 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 K7ENP7 123 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 PLD2O14939 933 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 RECQL5O94762 991 aaPredicted RBP24.04■■□□□ 1.44
LSM4-202ENST00000593564 RPLP0P05388 317 aaKnown RBP24.04■■□□□ 1.44
LSM4-202ENST00000593564 CCL7P80098 99 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 BCL2L1Q07817 233 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 CLN3Q13286 438 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 KCTD16Q68DU8 428 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 INO80CQ6PI98 192 aaPredicted RBP24.04■■□□□ 1.44
LSM4-202ENST00000593564 LIPIQ6XZB0 460 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 GPR156Q8NFN8 814 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 OR56A4Q8NGH8 313 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 OR1E3Q8WZA6 343 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 TTC9Q92623 222 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 FUBP1Q96AE4 644 aaKnown RBP24.04■■□□□ 1.44
LSM4-202ENST00000593564 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.04■■□□□ 1.44
LSM4-202ENST00000593564 SP110Q9HB58 689 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 PCSK1NQ9UHG2 260 aa24.04■■□□□ 1.44
LSM4-202ENST00000593564 CACNB4O00305 520 aaPredicted RBP24.03■■□□□ 1.44
LSM4-202ENST00000593564 DAPK3O43293 454 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 ATMINO43313 823 aaPredicted RBP24.03■■□□□ 1.44
LSM4-202ENST00000593564 HOXC4P09017 264 aaPredicted RBP24.03■■□□□ 1.44
LSM4-202ENST00000593564 ELFN1P0C7U0 828 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 ERCC2P18074 760 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 POLR2LP62875 67 aaKnown RBP24.03■■□□□ 1.44
LSM4-202ENST00000593564 IL10RBQ08334 325 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 DPPA4Q7L190 304 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 PSTKQ8IV42 348 aaKnown RBP24.03■■□□□ 1.44
LSM4-202ENST00000593564 NPWQ8N729 165 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 FNIP1Q8TF40 1166 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 STRADBQ9C0K7 418 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 EPB41L5Q9HCM4 733 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 FGF22Q9HCT0 170 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 PCDHGA7Q9Y5G6 932 aa24.03■■□□□ 1.44
LSM4-202ENST00000593564 TMEM202A6NGA9 273 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 TMEM191CA6NGB0 347 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 TMCO5BA8MYB1 307 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 DFFAO00273 331 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 TRAFD1O14545 582 aaPredicted RBP24.02■■□□□ 1.44
LSM4-202ENST00000593564 TNFRSF10CO14798 259 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 RNF8O76064 485 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 ATP1A3P13637 1013 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 KELP23276 732 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 CCKBRP32239 447 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 TRIM23P36406 574 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 ZNF135P52742 658 aaPredicted RBP24.02■■□□□ 1.44
LSM4-202ENST00000593564 INHBCP55103 352 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 OGFOD3Q6PK18 319 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 ARHGAP36Q6ZRI8 547 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 CYP4V2Q6ZWL3 525 aaPredicted RBP24.02■■□□□ 1.44
LSM4-202ENST00000593564 RAB11FIP2Q7L804 512 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 FBXO39Q8N4B4 442 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 TMEM74Q96NL1 305 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 LRRN3Q9H3W5 708 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 APPL1Q9UKG1 709 aa24.02■■□□□ 1.44
LSM4-202ENST00000593564 SETXQ7Z333 2677 aaKnown RBP24.02■■□□□ 1.44
LSM4-202ENST00000593564 AHCTF1Q8WYP5 2266 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 PRPSAP2O60256 369 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 GM2AP17900 193 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 MIPP30301 263 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 UGT1A5P35504 534 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 HCAR3P49019 387 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 AP1S1P61966 158 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 PPP6R3Q5H9R7 873 aaPredicted RBP24.01■■□□□ 1.43
LSM4-202ENST00000593564 CERCAMQ5T4B2 595 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 CCNJLQ8IV13 435 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 SPOCK2Q92563 424 aa24.01■■□□□ 1.43
LSM4-202ENST00000593564 GBP4Q96PP9 640 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms