RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GM2AP17900 193 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 CCKBRP32239 447 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 COPB1P53618 953 aaKnown RBP16.45■□□□□ 0.22
LIG1-205ENST00000593425 CA9Q16790 459 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 CFAP58Q5T655 872 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 CCNJLQ8IV13 435 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 Q8N9G6 341 aaPredicted RBP16.45■□□□□ 0.22
LIG1-205ENST00000593425 TSEN2Q8NCE0 465 aaKnown RBP16.45■□□□□ 0.22
LIG1-205ENST00000593425 FUBP1Q96AE4 644 aaKnown RBP16.45■□□□□ 0.22
LIG1-205ENST00000593425 PCMTD1Q96MG8 357 aaPredicted RBP16.45■□□□□ 0.22
LIG1-205ENST00000593425 TUBGCP5Q96RT8 1024 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 AGPAT1Q99943 283 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 CNPY3Q9BT09 278 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 SLC39A8Q9C0K1 460 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 STRADBQ9C0K7 418 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 FANCLQ9NW38 375 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 PISDQ9UG56 409 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 DGKBQ9Y6T7 804 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 RECQL5O94762 991 aaPredicted RBP16.44■□□□□ 0.22
LIG1-205ENST00000593425 TPM2P07951 284 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 ITIH1P19827 911 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
LIG1-205ENST00000593425 NDST2P52849 883 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 KIAA1024LP59773 190 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 SRLQ86TD4 932 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 MCOLN2Q8IZK6 566 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 PELI3Q8N2H9 469 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 OR6C4Q8NGE1 309 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 OR56A4Q8NGH8 313 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 ATL2Q8NHH9 583 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 ECHDC3Q96DC8 303 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 NSMCE3Q96MG7 304 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 TMEM74Q96NL1 305 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 ACSL6Q9UKU0 697 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 AP4E1Q9UPM8 1137 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 LOXL2Q9Y4K0 774 aa16.44■□□□□ 0.22
LIG1-205ENST00000593425 SETXQ7Z333 2677 aaKnown RBP16.43■□□□□ 0.22
LIG1-205ENST00000593425 ANKRD62A6NC57 917 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 TMX2-CTNND1H3BSU7 103 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 CACNB4O00305 520 aaPredicted RBP16.43■□□□□ 0.22
LIG1-205ENST00000593425 EEF2KO00418 725 aaKnown RBP16.43■□□□□ 0.22
LIG1-205ENST00000593425 JMJD7P0C870 316 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 GLB1P16278 677 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 SERPINA4P29622 427 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 CSNK1DP48730 415 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 CERCAMQ5T4B2 595 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 DCUN1D2Q6PH85 259 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 OGFOD3Q6PK18 319 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 LIPIQ6XZB0 460 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 ARHGAP36Q6ZRI8 547 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 TMPRSS9Q7Z410 1059 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 SPRED1Q7Z699 444 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 TAF8Q7Z7C8 310 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 ARHGAP12Q8IWW6 846 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 EXD3Q8N9H8 876 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 FAM46DQ8NEK8 389 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 CCL4L1Q8NHW4 92 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 PEBP4Q96S96 227 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 LGR4Q9BXB1 951 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 TMEM168Q9H0V1 697 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 ATP13A3Q9H7F0 1226 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 TAS2R14Q9NYV8 317 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 APPL1Q9UKG1 709 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 RNF215Q9Y6U7 377 aa16.43■□□□□ 0.22
LIG1-205ENST00000593425 ASH1LQ9NR48 2969 aaKnown RBP16.43■□□□□ 0.22
LIG1-205ENST00000593425 TENM4Q6N022 2769 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 CFAP69A5D8W1 941 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 ARHGAP42A6NI28 874 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 LGALS16A8MUM7 142 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 B4DGG1 531 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 SLC28A2O43868 658 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 PALMO75781 387 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 ELFN1P0C7U0 828 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 LIPCP11150 499 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 HTR7P34969 479 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 ETV5P41161 510 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
LIG1-205ENST00000593425 HLTFQ14527 1009 aaKnown RBP eCLIP16.42■□□□□ 0.22
LIG1-205ENST00000593425 LINC00303Q3SY05 128 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 C14orf28Q4W4Y0 310 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 AFMIDQ63HM1 303 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 DPPA4Q7L190 304 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 ARFGAP1Q8N6T3 406 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 NPWQ8N729 165 aa16.42■□□□□ 0.22
LIG1-205ENST00000593425 SNRNP25Q9BV90 132 aaKnown RBP16.42■□□□□ 0.22
LIG1-205ENST00000593425 CINPQ9BW66 212 aaPredicted RBP16.42■□□□□ 0.22
LIG1-205ENST00000593425 DHX35Q9H5Z1 703 aaKnown RBP16.42■□□□□ 0.22
LIG1-205ENST00000593425 LIMA1Q9UHB6 759 aaKnown RBP16.42■□□□□ 0.22
LIG1-205ENST00000593425 PRAMEF33A0A0G2JMD5 474 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 A8MX80 341 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 ATMINO43313 823 aaPredicted RBP16.41■□□□□ 0.22
LIG1-205ENST00000593425 PRAMEF10O60809 474 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 UBXN1Q04323 297 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 BCL2L1Q07817 233 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 SPECC1LQ69YQ0 1117 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 ACAD10Q6JQN1 1059 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 SLITRK4Q8IW52 837 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 TP53INP2Q8IXH6 220 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms