RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SLCO3A1Q9UIG8 710 aa13.56□□□□□ -0.24
VMP1-217ENST00000593168 TCAF1Q9Y4C2 921 aa13.56□□□□□ -0.24
VMP1-217ENST00000593168 FAM169AQ9Y6X4 670 aa13.56□□□□□ -0.24
VMP1-217ENST00000593168 TLDC2A0PJX2 215 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 HEATR9A2RTY3 570 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 DCDC2BA2VCK2 349 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 FAM159BA6NKW6 160 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 H3BQF6 201 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 ARNTLO00327 626 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 FZD6O60353 706 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 CDH16O75309 829 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 PRLP01236 227 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 SDHBP21912 280 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 OPRD1P41143 372 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 RPL26P61254 145 aaKnown RBP13.55□□□□□ -0.24
VMP1-217ENST00000593168 TRAF2Q12933 501 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 CRYMQ14894 314 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 CARD16Q5EG05 197 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 ATXN7L2Q5T6C5 722 aaPredicted RBP13.55□□□□□ -0.24
VMP1-217ENST00000593168 NLRP9Q7RTR0 991 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 KRT222Q8N1A0 295 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 PHTF2Q8N3S3 785 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 KDM1BQ8NB78 822 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 EPS8L3Q8TE67 593 aaKnown RBP13.55□□□□□ -0.24
VMP1-217ENST00000593168 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 ATP6V1G3Q96LB4 118 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 FCRL3Q96P31 734 aaPredicted RBP13.55□□□□□ -0.24
VMP1-217ENST00000593168 DHRS4Q9BTZ2 278 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 ADGRE3Q9BY15 652 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
VMP1-217ENST00000593168 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 ELOVL2Q9NXB9 296 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 EURLQ9NYK6 297 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 LGALS13Q9UHV8 139 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 EVLQ9UI08 416 aaPredicted RBP13.55□□□□□ -0.24
VMP1-217ENST00000593168 RPL26L1Q9UNX3 145 aaKnown RBP13.55□□□□□ -0.24
VMP1-217ENST00000593168 SLC8A2Q9UPR5 921 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 CHKBQ9Y259 395 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 PCDHGC4Q9Y5F7 938 aa13.55□□□□□ -0.24
VMP1-217ENST00000593168 ZCWPW2A0A1B0GU75 182 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 PRR5-ARHGAP8B1AHC4 643 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 HMGB1P1B2RPK0 211 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 ANKRD66B4E2M5 251 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 RGS16O15492 202 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 HTRA2O43464 458 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 SOCS5O75159 536 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 PAPSS2O95340 614 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 POP4O95707 220 aaKnown RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 GCAP28676 217 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 RPS9P46781 194 aaKnown RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 ARHGAP8P85298 464 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 RAD51Q06609 339 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 GRM3Q14832 879 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 POU6F1Q14863 301 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 PTPRNQ16849 979 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 MYLK3Q32MK0 819 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 KBTBD12Q3ZCT8 623 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 ACCSLQ4AC99 568 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 TNFAIP8L3Q5GJ75 292 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 TERB1Q8NA31 727 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
VMP1-217ENST00000593168 BRSK1Q8TDC3 778 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 FRS2Q8WU20 508 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 SPOCK2Q92563 424 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 CDKL2Q92772 493 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 PEX13Q92968 403 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 ZNF669Q96BR6 464 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 MYO19Q96H55 970 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 TUBGCP5Q96RT8 1024 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 TRIM56Q9BRZ2 755 aaKnown RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 CIPCQ9C0C6 399 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 STMN4Q9H169 189 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 TNKS2Q9H2K2 1166 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 ATP13A3Q9H7F0 1226 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 BRD9Q9H8M2 597 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 PRMT8Q9NR22 394 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 HEBP1Q9NRV9 189 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 HECAQ9UBI9 543 aaPredicted RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
VMP1-217ENST00000593168 RIMKLBQ9ULI2 386 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 SPTBN2O15020 2390 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 TICRRQ7Z2Z1 1910 aa13.54□□□□□ -0.24
VMP1-217ENST00000593168 A0A1W2PQ67 120 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 MROH6A6NGR9 719 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 PRRT4C9JH25 899 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
VMP1-217ENST00000593168 PGLSO95336 258 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 PDHA1P08559 390 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 NMBRP28336 390 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 OAS2P29728 719 aaKnown RBP13.53□□□□□ -0.24
VMP1-217ENST00000593168 MSH2P43246 934 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 RECQLP46063 649 aaPredicted RBP13.53□□□□□ -0.24
VMP1-217ENST00000593168 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
VMP1-217ENST00000593168 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms