RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 SYT12Q8IV01 421 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 RGL4Q8IZJ4 473 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 BBS5Q8N3I7 341 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 MNS1Q8NEH6 495 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 OR8D1Q8WZ84 308 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 SNX19Q92543 992 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 MIR1-1HGQ9H1L0 117 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 HOMER3Q9NSC5 361 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 DLL3Q9NYJ7 618 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 GRHL1Q9NZI5 618 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 PAK5Q9P286 719 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 PILRBQ9UKJ0 227 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 TRHDEQ9UKU6 1024 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 PCDHB9Q9Y5E1 797 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 NUMA1Q14980 2115 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 GON4LQ3T8J9 2241 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 CCDC78A2IDD5 438 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 TARSL2A2RTX5 802 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 C16orf96A6NNT2 1141 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 EFCAB8A8MWE9 144 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 DNALI1O14645 258 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 AURKAO14965 403 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 BUD23O43709 281 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 FZD6O60353 706 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 RNASEH1O60930 286 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 RNASEH2AO75792 299 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 PGLSO95336 258 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 GAS8O95995 478 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 CPP00450 1065 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 APRTP07741 180 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 SERPINF2P08697 491 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 TIMP2P16035 220 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 TPH1P17752 444 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 OXTRP30559 389 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 STIP1P31948 543 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 ADCY8P40145 1251 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 MAPK8P45983 427 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 CSNK1DP48730 415 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 ITGA8P53708 1063 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 CRADDP78560 199 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 GUCY2DQ02846 1103 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 BCL2L1Q07817 233 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 DHX34Q14147 1143 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 PUM1Q14671 1186 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 PTPRCAPQ14761 206 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 QPCTQ16769 361 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 PARP6Q2NL67 630 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 TTC31Q49AM3 519 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 SIRPB2Q5JXA9 342 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 SPDYCQ5MJ68 293 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 PIP5KL1Q5T9C9 394 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 STPG1Q5TH74 334 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 AGBL4Q5VU57 503 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 DENND2CQ68D51 928 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 DUPD1Q68J44 220 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 DENND5AQ6IQ26 1287 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 RFLNAQ6ZTI6 216 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 DGLUCYQ7Z3D6 616 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 KLHDC8BQ8IXV7 354 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 MPP5Q8N3R9 675 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 OR52K1Q8NGK4 314 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 NETO1Q8TDF5 533 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 GRK7Q8WTQ7 553 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 PIH1D2Q8WWB5 315 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 ECHDC3Q96DC8 303 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 VAT1Q99536 393 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 WDR83Q9BRX9 315 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 EDEM2Q9BV94 578 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 PABPC3Q9H361 631 aaKnown RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 C6orf106Q9H6K1 298 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 FBRSQ9HAH7 460 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 HAUS2Q9NVX0 235 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 FBXL12Q9NXK8 326 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 FAM153AQ9UHL3 310 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 FARP1Q9Y4F1 1045 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-220ENST00000593008 THADAQ6YHU6 1953 aa9.7□□□□□ -0.86
DDX39A-220ENST00000593008 CXorf51AA0A1B0GTR3 108 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 TSPAN11A1L157 253 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 NPIPB15A6NHN6 443 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 C4orf47A7E2U8 309 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 METTL12A8MUP2 240 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 CCL22O00626 93 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 HTRA2O43464 458 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 FOXD2O60548 495 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 SEC31AO94979 1220 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 FSBPO95073 299 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 SLU7O95391 586 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 POP4O95707 220 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 SEMA4FO95754 770 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 AP2A1O95782 977 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 IGLV3-19P01714 112 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 F7P08709 466 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 MYBL2P10244 700 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 LHCGRP22888 699 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 SERPINA4P29622 427 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ECHS1P30084 290 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 TAS2R38P59533 333 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ZBTB16Q05516 673 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 CDK18Q07002 472 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms