RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 RAD51Q06609 339 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 TRAF2Q12933 501 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 SYT10Q6XYQ8 523 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 ZCCHC9Q8N567 271 aaKnown RBP21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 TEKT5Q96M29 485 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 TUBGCP5Q96RT8 1024 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 CDC6Q99741 560 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 TMEM121Q9BTD3 319 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 GPR174Q9BXC1 333 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 IL21RQ9HBE5 538 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 AMACRQ9UHK6 382 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 PLXNB3Q9ULL4 1909 aa21.64■■□□□ 1.05
R3HDM4-206ENST00000590454 CTAGE9A4FU28 777 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 SPINT1O43278 529 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 TIMP2P16035 220 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 ABL2P42684 1182 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 BCL2L1Q07817 233 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 OASLQ15646 514 aaKnown RBP21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 DBX2Q6ZNG2 339 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 ERN2Q76MJ5 926 aaKnown RBP21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 PRPF39Q86UA1 669 aaKnown RBP21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 GALNT15Q8N3T1 639 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 PRELID2Q8N945 189 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 FAM71DQ8N9W8 422 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 BAHD1Q8TBE0 780 aaPredicted RBP21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 RHBDD1Q8TEB9 315 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 C16orf45Q96MC5 204 aaPredicted RBP21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 AP1M1Q9BXS5 423 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 OSBPL1AQ9BXW6 950 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 HDAC8Q9BY41 377 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 ATP13A3Q9H7F0 1226 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 GLOD4Q9HC38 313 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 TOR4AQ9NXH8 423 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 GGT7Q9UJ14 662 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 TTC7AQ9ULT0 858 aaPredicted RBP21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 FZD4Q9ULV1 537 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 NCKAP1Q9Y2A7 1128 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 PCDHGB2Q9Y5G2 931 aa21.63■■□□□ 1.05
R3HDM4-206ENST00000590454 LAMA5O15230 3695 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 BCAT2O15382 392 aaPredicted RBP21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 FLRT2O43155 660 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 DKK1O94907 266 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 PRKCGP05129 697 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 NFKB1P19838 968 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 OXTRP30559 389 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 CD86P42081 329 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 ADPRHP54922 357 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 SKOR1P84550 965 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 CYP4F3Q08477 520 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 HLA-BQ31612 363 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 OR14C36Q8NHC7 312 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 SPATA22Q8NHS9 363 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 CCDC110Q8TBZ0 833 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 PPP1R16AQ96I34 528 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 ZNF641Q96N77 438 aaPredicted RBP21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 RBM15Q96T37 977 aaKnown RBP eCLIP21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 GORASP1Q9BQQ3 440 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 BTBD1Q9H0C5 482 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 C6orf106Q9H6K1 298 aaPredicted RBP21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 KLHL8Q9P2G9 620 aaPredicted RBP21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 ITM2BQ9Y287 266 aa21.62■■□□□ 1.05
R3HDM4-206ENST00000590454 TSPAN11A1L157 253 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 TRABD2BA6NFA1 517 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 FAM47DPA6NHR8 397 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 METTL12A8MUP2 240 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 MTSS1O43312 755 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 ATXN1LP0C7T5 689 aaKnown RBP21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 ADRB3P13945 408 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 SERPINA4P29622 427 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 KCNJ1P48048 391 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 NEK3P51956 506 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 SEMG2Q02383 582 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 SUZ12Q15022 739 aaKnown RBP21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 PTPRRQ15256 657 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 CCNG2Q16589 344 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 PID1Q7Z2X4 250 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 PRUNE1Q86TP1 453 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 ACTRT1Q8TDG2 376 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 ECHDC3Q96DC8 303 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 IMP4Q96G21 291 aaKnown RBP21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 CAPZA3Q96KX2 299 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 SMIM14Q96QK8 99 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 DYRK4Q9NR20 520 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 UBP1Q9NZI7 540 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 DKK3Q9UBP4 350 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 FNDC3AQ9Y2H6 1198 aaKnown RBP21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 RAI2Q9Y5P3 530 aa21.61■■□□□ 1.05
R3HDM4-206ENST00000590454 A0A087WV48 116 aa21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 PGRMC1O00264 195 aaKnown RBP21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 CES2O00748 559 aa21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 HTRA2O43464 458 aaPredicted RBP21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 PLRG1O43660 514 aaKnown RBP21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 ZIC2O95409 532 aaPredicted RBP21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 SEMA4FO95754 770 aa21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 MT-CYBP00156 380 aaPredicted RBP21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 PDHA1P08559 390 aa21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 PRLRP16471 622 aa21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 TCP1P17987 556 aaKnown RBP21.6■■□□□ 1.05
R3HDM4-206ENST00000590454 CASQ1P31415 396 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms