RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 KLK10O43240 276 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 TNFP01375 233 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 GZMAP12544 262 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 MIPP30301 263 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 ZNF135P52742 658 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 IL10RBQ08334 325 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 NSUN2Q08J23 767 aaKnown RBP eCLIP18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 AFMIDQ63HM1 303 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 FOXR1Q6PIV2 292 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 ZSWIM9Q86XI8 627 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 ARHGAP12Q8IWW6 846 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 PCDH19Q8TAB3 1148 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 FNIP1Q8TF40 1166 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 WDR92Q96MX6 357 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 SLC46A1Q96NT5 459 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 CNOT8Q9UFF9 292 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 GPR34Q9UPC5 381 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 PCDHGA8Q9Y5G5 932 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 SCINQ9Y6U3 715 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 LRP4O75096 1905 aa18.05■□□□□ 0.48
PRKCSH-211ENST00000590098 A0A1W2PNU3 283 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 CACNB4O00305 520 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 ELFN1P0C7U0 828 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 HCAR3P49019 387 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 SCNN1BP51168 640 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 RENBPP51606 427 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 ZNF571Q7Z3V5 609 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 ARL14Q8N4G2 192 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 LZTR1Q8N653 840 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 KYQ8NBH2 561 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 WDR36Q8NI36 951 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 ZNF653Q96CK0 615 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 TRIM11Q96F44 468 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 CCDC97Q96F63 343 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 MRPL47Q9HD33 250 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 AIPL1Q9NZN9 384 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 SEPT3Q9UH03 358 aa18.04■□□□□ 0.48
PRKCSH-211ENST00000590098 CCDC187A0A096LP49 1063 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 C1QL1O75973 258 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 RECQL5O94762 991 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 KELP23276 732 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 KLHL30Q0D2K2 578 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 ARHGAP36Q6ZRI8 547 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 NYAP1Q6ZVC0 841 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 NPWQ8N729 165 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 PLA2G15Q8NCC3 412 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 OR6C4Q8NGE1 309 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 CCDC74AQ96AQ1 378 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 ECHDC3Q96DC8 303 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 RBM15Q96T37 977 aaKnown RBP eCLIP18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 TRIM7Q9C029 511 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 ZWILCHQ9H900 591 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 CWC15Q9P013 229 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 MYO1AQ9UBC5 1043 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 UNC13CQ8NB66 2214 aa18.03■□□□□ 0.48
PRKCSH-211ENST00000590098 A0A1W2PQC6 194 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 H3BRJ5 948 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 TMX2-CTNND1H3BSU7 103 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 DDX3XO00571 662 aaKnown RBP eCLIP18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 LRCH4O75427 683 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 TNFSF15O95150 251 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 MYBL1P10243 752 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 PRKCIP41743 596 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 MLLT3P42568 568 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 KIAA1024LP59773 190 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 AP1S1P61966 158 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 RALGDSQ12967 914 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 ZNF235Q14590 738 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 LBRQ14739 615 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 ARHGAP40Q5TG30 622 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 TMCO4Q5TGY1 634 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 PCSK4Q6UW60 755 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 LIPIQ6XZB0 460 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 CYP4V2Q6ZWL3 525 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 DPPA4Q7L190 304 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 OR56A4Q8NGH8 313 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 ZNF599Q96NL3 588 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 PSKH2Q96QS6 385 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 GFM1Q96RP9 751 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 CPNE5Q9HCH3 593 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 DGKBQ9Y6T7 804 aa18.02■□□□□ 0.48
PRKCSH-211ENST00000590098 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 PMS2P1A4D2B8 440 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 A8MX80 341 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 NTN3O00634 580 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 PCK1P35558 622 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 ARL4AP40617 200 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 DPYSQ14117 519 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 ACOX1Q15067 660 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 TAF8Q7Z7C8 310 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 OR1E3Q8WZA6 343 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 FUBP1Q96AE4 644 aaKnown RBP18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 PDXPQ96GD0 296 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 PRR11Q96HE9 360 aaPredicted RBP18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 STRADBQ9C0K7 418 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 EPB41L5Q9HCM4 733 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 TMEM63CQ9P1W3 806 aa18.01■□□□□ 0.47
PRKCSH-211ENST00000590098 A0A1W2PQ67 120 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 TMEM202A6NGA9 273 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms