RNA–Protein interactions for RNA: ENST00000589863.5

SAFB-207, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 2,708 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-207ENST00000589863 PCSK1P29120 753 aa17.05■□□□□ 0.32
SAFB-207ENST00000589863 CD86P42081 329 aa17.05■□□□□ 0.32
SAFB-207ENST00000589863 FBXO48Q5FWF7 155 aa17.05■□□□□ 0.32
SAFB-207ENST00000589863 RETREG3Q86VR2 466 aa17.05■□□□□ 0.32
SAFB-207ENST00000589863 CAAP1Q9H8G2 361 aa17.05■□□□□ 0.32
SAFB-207ENST00000589863 NMUR1Q9HB89 426 aa17.05■□□□□ 0.32
SAFB-207ENST00000589863 SLC38A7Q9NVC3 462 aa17.05■□□□□ 0.32
SAFB-207ENST00000589863 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.05■□□□□ 0.32
SAFB-207ENST00000589863 LAMA3Q16787 3333 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 ZNF236Q9UL36 1845 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 NRP2O60462 931 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 SIX3O95343 332 aaPredicted RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 ITGB1P05556 798 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 EIF4EBP2Q13542 120 aaPredicted RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 UPP1Q16831 310 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 PABPC1LQ4VXU2 614 aaKnown RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 MANEALQ5VSG8 457 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 RNF217Q8TC41 542 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 DIS3LQ8TF46 1054 aaKnown RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 CANT1Q8WVQ1 401 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 TSPAN18Q96SJ8 248 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 TMEM79Q9BSE2 394 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 NOL6Q9H6R4 1146 aaKnown RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 DSEQ9UL01 958 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 CNOT6Q9ULM6 557 aaKnown RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 NYNRINQ9P2P1 1898 aaKnown RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 hCG_2014768A0A024R1R8 64 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 E9PAM4 449 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 HNRNPRO43390 633 aaKnown RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 OR4Q2P0C623 313 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 CHRM3P20309 590 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 SOX11P35716 441 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 GRIA3P42263 894 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 ZNF135P52742 658 aaPredicted RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 CDH15P55291 814 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 DSC2Q02487 901 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 SLC10A7Q0GE19 358 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 SDHAF4Q5VUM1 108 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 KDELC1Q6UW63 502 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 GTF3C2Q8WUA4 911 aaPredicted RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 HDAC10Q969S8 669 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 PTERQ96BW5 349 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 PABPC5Q96DU9 382 aaKnown RBP17.04■□□□□ 0.32
SAFB-207ENST00000589863 ZNF597Q96LX8 424 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 CD300AQ9UGN4 299 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 HS3ST4Q9Y661 456 aa17.04■□□□□ 0.32
SAFB-207ENST00000589863 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
SAFB-207ENST00000589863 HAPLN1P10915 354 aaPredicted RBP17.03■□□□□ 0.32
SAFB-207ENST00000589863 ATP6V1B2P21281 511 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 CCR1P32246 355 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 SLC5A3P53794 718 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 ZNF33AQ06730 810 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 TSPAN14Q8NG11 270 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 STON2Q8WXE9 905 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 RPL10LQ96L21 214 aaKnown RBP17.03■□□□□ 0.32
SAFB-207ENST00000589863 UBXN10Q96LJ8 280 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 PTPN18Q99952 460 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 CATSPERBQ9H7T0 1116 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 CROTQ9UKG9 612 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 DMTF1Q9Y222 760 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 VWA7Q9Y334 891 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 FAM149AA5PLN7 773 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 TPST1O60507 370 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 ZNF865P0CJ78 1059 aaPredicted RBP17.03■□□□□ 0.32
SAFB-207ENST00000589863 DNAJB1P25685 340 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 LEPRP48357 1165 aaKnown RBP17.03■□□□□ 0.32
SAFB-207ENST00000589863 HSPA13P48723 471 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 POLD2P49005 469 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 FOXA1P55317 472 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 USP46P62068 366 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 LARP4Q71RC2 724 aaKnown RBP eCLIP17.03■□□□□ 0.321e-8■□□□□ 10.5
SAFB-207ENST00000589863 SCD5Q86SK9 330 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 ISCA2Q86U28 154 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 NUP93Q8N1F7 819 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 IRGQQ8WZA9 623 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 CCT7Q99832 543 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 EML4Q9HC35 981 aaKnown RBP17.03■□□□□ 0.32
SAFB-207ENST00000589863 EGFL7Q9UHF1 273 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 CPA4Q9UI42 421 aa17.03■□□□□ 0.32
SAFB-207ENST00000589863 SAC3D1A6NKF1 404 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 SOCS2O14508 198 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 PSMD8P48556 350 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 KPNA2P52292 529 aaKnown RBP17.02■□□□□ 0.32
SAFB-207ENST00000589863 PRAMEP78395 509 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 USP41Q3LFD5 358 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 LRRC23Q53EV4 343 aaPredicted RBP17.02■□□□□ 0.32
SAFB-207ENST00000589863 KLC3Q6P597 504 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 FAM171BQ6P995 826 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 CILP2Q8IUL8 1156 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 PTCD2Q8WV60 388 aaKnown RBP17.02■□□□□ 0.32
SAFB-207ENST00000589863 KCNA7Q96RP8 456 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 MRM3Q9HC36 420 aaKnown RBP17.02■□□□□ 0.32
SAFB-207ENST00000589863 OSER1Q9NX31 292 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 PLK2Q9NYY3 685 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 TMEM181Q9P2C4 612 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 ATXN10Q9UBB4 475 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 SARDHQ9UL12 918 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 CEPT1Q9Y6K0 416 aa17.02■□□□□ 0.32
SAFB-207ENST00000589863 TCRBV3S1A0A5B6 114 aa17.02■□□□□ 0.31
SAFB-207ENST00000589863 PDLIM1O00151 329 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms