RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TBKBP1A7MCY6 615 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 A8MT66 165 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 PITPNM1O00562 1244 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 CD3EAPO15446 510 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 NDST3O95803 873 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 BAG2O95816 211 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 OGNP20774 298 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 ARSDP51689 593 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 KCNQ1P51787 676 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 MTTPP55157 894 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 PDCD2Q16342 344 aaPredicted RBP19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 SNX32Q86XE0 403 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 FBXO22Q8NEZ5 403 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 BLOC1S5Q8TDH9 187 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 MAELQ96JY0 434 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 TTC1Q99614 292 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 PPP1R12CQ9BZL4 782 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 POPDC3Q9HBV1 291 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 ACSS2Q9NR19 701 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 GEMIN8Q9NWZ8 242 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 BCAP29Q9UHQ4 241 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 CHD5Q8TDI0 1954 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 CES1P23141 567 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 MRPS35P82673 323 aaKnown RBP19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 RFTN1Q14699 578 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 GPNMBQ14956 572 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 IRGCQ6NXR0 463 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 KLHDC10Q6PID8 442 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 PLD4Q96BZ4 506 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 PPP1R36Q96LQ0 422 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 TBATAQ96M53 351 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 ZNF184Q99676 751 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 UNKQ9C0B0 810 aaKnown RBP19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 VCX3BQ9H321 246 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 POMPQ9Y244 141 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 DNAH12Q6ZR08 3092 aa19.23■□□□□ 0.67
PRKCSH-209ENST00000589838 NT5C1B-RDH14C9J2C7 533 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 AIM2O14862 343 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 ZMPSTE24O75844 475 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 WISP3O95389 354 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 CRTAMO95727 393 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 ATF6P18850 670 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 KLC1Q07866 573 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 ARHGEF6Q15052 776 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 HECTD3Q5T447 861 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 IL31Q6EBC2 164 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 FAM126BQ8IXS8 530 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 LRRC43Q8N309 656 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 ZNF512Q96ME7 567 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 CATSPER2Q96P56 530 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 LBHD1Q9BQE6 289 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 MGME1Q9BQP7 344 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 CINPQ9BW66 212 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 EFCAB1Q9HAE3 211 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 ZBTB26Q9HCK0 441 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 UBA2Q9UBT2 640 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 VPS28Q9UK41 221 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 ARIH1Q9Y4X5 557 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 KDELR3O43731 214 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 SMIM24O75264 130 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 CLDN11O75508 207 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 PDE5AO76074 875 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 GOT2P00505 430 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 IMPDH1P20839 514 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 NUDT2P50583 147 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 OXCT1P55809 520 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 USP41Q3LFD5 358 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 SLC8B1Q6J4K2 584 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 PRSS55Q6UWB4 352 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 TAS1R1Q7RTX1 841 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 CFAP52Q8N1V2 620 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 OR4L1Q8NH43 312 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 SLC26A7Q8TE54 656 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 MYEOVQ96EZ4 313 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 CAPNS2Q96L46 248 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 PSKH2Q96QS6 385 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 OSBPL1AQ9BXW6 950 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 CATSPERZQ9NTU4 200 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 MARCH4Q9P2E8 410 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 MTRRQ9UBK8 725 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 G3BP2Q9UN86 482 aaKnown RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 KCTD3Q9Y597 815 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 BACE2Q9Y5Z0 518 aa19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 ZFP37Q9Y6Q3 630 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-209ENST00000589838 SDHDO14521 159 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 MUSKO15146 869 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 FDXRP22570 491 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 SLC6A4P31645 630 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 CDKN2DP55273 166 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 CCNIQ14094 377 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 ANO7Q6IWH7 933 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 DNAJC1Q96KC8 554 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 ASB2Q96Q27 587 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 CYP4F12Q9HCS2 524 aa19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 INTS10Q9NVR2 710 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-209ENST00000589838 ILVBLA1L0T0 632 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 CCDC162PA2VCL2 907 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 NEMP2A6NFY4 417 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 TRPA1O75762 1119 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 HNRNPLP14866 589 aaKnown RBP eCLIP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms