RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CPNE6O95741 557 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 NTRK1P04629 796 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 ALDH4A1P30038 563 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 MMP12P39900 470 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 KIAA1024LP59773 190 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 HLTFQ14527 1009 aaKnown RBP eCLIP15.32■□□□□ 0.04
ACTN4-211ENST00000589528 OGFOD3Q6PK18 319 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 PTRH1Q86Y79 214 aaKnown RBP15.32■□□□□ 0.04
ACTN4-211ENST00000589528 CCDC185Q8N715 623 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 RTL3Q8N8U3 475 aaKnown RBP15.32■□□□□ 0.04
ACTN4-211ENST00000589528 CCDC112Q8NEF3 446 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 FAM172AQ8WUF8 416 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 OR1E3Q8WZA6 343 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 ZNF641Q96N77 438 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-211ENST00000589528 FUCA2Q9BTY2 467 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 MAGEB5Q9BZ81 275 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 B3GNT4Q9C0J1 378 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 TMEM168Q9H0V1 697 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 NDST4Q9H3R1 872 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 SUDS3Q9H7L9 328 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-211ENST00000589528 CYP4F12Q9HCS2 524 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 MRPL40Q9NQ50 206 aaKnown RBP15.32■□□□□ 0.04
ACTN4-211ENST00000589528 ANKMY1Q9P2S6 941 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 UBA2Q9UBT2 640 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-211ENST00000589528 NEU3Q9UQ49 428 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 ATP8A1Q9Y2Q0 1164 aa15.32■□□□□ 0.04
ACTN4-211ENST00000589528 TMEM202A6NGA9 273 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 RASA4BC9J798 803 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 RASA4O43374 803 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 CREB3O43889 395 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 PRKCGP05129 697 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 ELFN1P0C7U0 828 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 WT1P19544 449 aaPredicted RBP15.31■□□□□ 0.04
ACTN4-211ENST00000589528 PTPN9P43378 593 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 YBEYP58557 167 aaPredicted RBP15.31■□□□□ 0.04
ACTN4-211ENST00000589528 SERINC3Q13530 473 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 C16orf72Q14CZ0 275 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 AGERQ15109 404 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
ACTN4-211ENST00000589528 PARP15Q460N3 678 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 VWA3BQ502W6 1294 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 EFHC2Q5JST6 749 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 KLHDC7AQ5VTJ3 777 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 KCTD16Q68DU8 428 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 TMPRSS9Q7Z410 1059 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 SLFN11Q7Z7L1 901 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 PLA2G15Q8NCC3 412 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 C11orf70Q9BRQ4 267 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 ZMYND15Q9H091 742 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 KLC2Q9H0B6 622 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 CATSPERBQ9H7T0 1116 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 FGF22Q9HCT0 170 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 LHX3Q9UBR4 397 aa15.31■□□□□ 0.04
ACTN4-211ENST00000589528 TSPAN11A1L157 253 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 C2CD4BA6NLJ0 364 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 PDE2AO00408 941 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 TNFRSF10CO14798 259 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 HGSO14964 777 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 RECQL5O94762 991 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 CCL4P13236 92 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 SERPINA4P29622 427 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 PPM1FP49593 454 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 POLE2P56282 527 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 HDAC4P56524 1084 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 KCNAB2Q13303 367 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 UBAP2LQ14157 1087 aaKnown RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 SCYL2Q6P3W7 929 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 ZNF677Q86XU0 584 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 CAMK1DQ8IU85 385 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 SFTPA2Q8IWL1 248 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 PYROXD2Q8N2H3 581 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 RCBTB1Q8NDN9 531 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 JOSD2Q8TAC2 188 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 ZNF564Q8TBZ8 553 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 GPBAR1Q8TDU6 330 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 EPS8L1Q8TE68 723 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 NTAN1Q96AB6 310 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 FUBP1Q96AE4 644 aaKnown RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 TAAR9Q96RI9 348 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 TUBGCP5Q96RT8 1024 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 TUBGCP2Q9BSJ2 902 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 SELENOOQ9BVL4 669 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 NOL6Q9H6R4 1146 aaKnown RBP15.3■□□□□ 0.04
ACTN4-211ENST00000589528 WDR26Q9H7D7 661 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 ATP13A3Q9H7F0 1226 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 KIAA1468Q9P260 1216 aa15.3■□□□□ 0.04
ACTN4-211ENST00000589528 NBASA2RRP1 2371 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 PRSS38A1L453 326 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-211ENST00000589528 F8VZ95 297 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 TEX33O43247 280 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 KRT3P12035 628 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 UCHL3P15374 230 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 CCR10P46092 362 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 MAZP56270 477 aaKnown RBP15.29■□□□□ 0.04
ACTN4-211ENST00000589528 OR1D5P58170 312 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 ILF3Q12906 894 aaKnown RBP eCLIP15.29■□□□□ 0.04
ACTN4-211ENST00000589528 CYTH1Q15438 398 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 CAMK4Q16566 473 aa15.29■□□□□ 0.04
ACTN4-211ENST00000589528 SKIDA1Q1XH10 827 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms