RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CKAP5Q14008 2032 aa3.61□□□□□ -1.83
SMAD4-207ENST00000589076 RSF1Q96T23 1441 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-207ENST00000589076 A0A1W2PRG0 241 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 A6NNC1 897 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 EIF3CLB5ME19 914 aaKnown RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 K7ENM7 598 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 MDM4O15151 490 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 LDLRAD4O15165 306 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 DOK2O60496 412 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 PTP4A3O75365 173 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 PAPSS2O95340 614 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 MT-CYBP00156 380 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 TFP02787 698 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 EIF2S1P05198 315 aaKnown RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 HOXB5P09067 269 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 HOXB2P14652 356 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 MAPK4P31152 587 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 AVPR1AP37288 418 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 DRG2P55039 364 aaKnown RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 OLR1P78380 273 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 GOLGA8DPQ0D2H9 430 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 RUNX2Q13950 521 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 PPP2R5BQ15173 497 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 DPCR1Q3MIW9 517 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 Q5PR19 223 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 WASHC2DQ5SRD0 308 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 ASPHD1Q5U4P2 390 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 GPSM1Q86YR5 675 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 LURAP1LQ8IV03 231 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 RPAP2Q8IXW5 612 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 PDILTQ8N807 584 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 CREB3L4Q8TEY5 395 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 POMGNT1Q8WZA1 660 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 OTULINQ96BN8 352 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 INTS12Q96CB8 462 aaKnown RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 SDF4Q9BRK5 362 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 STRA6Q9BX79 667 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 SEZ6LQ9BYH1 1024 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 GLIS2Q9BZE0 524 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 TMX4Q9H1E5 349 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 PLEKHA4Q9H4M7 779 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 C6orf106Q9H6K1 298 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 MVB12BQ9H7P6 319 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 ASAH2Q9NR71 780 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 SEPT11Q9NVA2 429 aaKnown RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 NDRG3Q9UGV2 375 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 SLCO3A1Q9UIG8 710 aa3.6□□□□□ -1.83
SMAD4-207ENST00000589076 INTS6Q9UL03 887 aaKnown RBP3.6□□□□□ -1.83
SMAD4-207ENST00000589076 FAM237BA0A1B0GVD1 139 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 A0A1W2PPC1 479 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 RPS10-NUDT3A0A1W2PQS6 291 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 KLRF2D3W0D1 207 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 H0YGN5 161 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 TNFRSF13BO14836 293 aaPredicted RBP3.59□□□□□ -1.83
SMAD4-207ENST00000589076 BCAT2O15382 392 aaPredicted RBP3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SEC14L5O43304 696 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 PAGE4O60829 102 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 MTA2O94776 668 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SEC31AO94979 1220 aaKnown RBP3.59□□□□□ -1.83
SMAD4-207ENST00000589076 ALOX12P18054 663 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SRD5A1P18405 259 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 CDAP32320 146 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 RASSF2P50749 326 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 EFNA5P52803 228 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 CDH12P55289 794 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 CLDN2P57739 230 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 OLIG2Q13516 323 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 LPIN1Q14693 890 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 DCAF6Q58WW2 860 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 FAM205BPQ63HN1 556 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 TMEM71Q6P5X7 295 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 CCDC129Q6ZRS4 1044 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SLC16A12Q6ZSM3 486 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 IKBIPQ70UQ0 350 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 DENND6AQ8IWF6 608 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 ZCCHC9Q8N567 271 aaKnown RBP3.59□□□□□ -1.83
SMAD4-207ENST00000589076 FRMD1Q8N878 549 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 TEX45Q8NA69 505 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 TMEM116Q8NCL8 245 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 CEP76Q8TAP6 659 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 TMEM163Q8TC26 289 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SLC35F5Q8WV83 523 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 OIT3Q8WWZ8 545 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SNAPC3Q92966 411 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 GTF3C6Q969F1 213 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 BBS4Q96RK4 519 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 YME1L1Q96TA2 773 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 WDR77Q9BQA1 342 aaPredicted RBP3.59□□□□□ -1.83
SMAD4-207ENST00000589076 TM6SF1Q9BZW5 370 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 CCDC68Q9H2F9 335 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 GHITMQ9H3K2 345 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 KLHL31Q9H511 634 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SYNCQ9H7C4 482 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 SMYD2Q9NRG4 433 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 PLSCR4Q9NRQ2 329 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 ANKRD10Q9NXR5 420 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 NSMCE4AQ9NXX6 385 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 MYO6Q9UM54 1294 aa3.59□□□□□ -1.83
SMAD4-207ENST00000589076 CAPN7Q9Y6W3 813 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms