RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 ELK3P41970 407 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 MAGEA4P43358 317 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 DGKEP52429 567 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 FZD5Q13467 585 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 SEPT6Q14141 434 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 UGP2Q16851 508 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 SYT13Q7L8C5 426 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 PYROXD1Q8WU10 500 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 SPOCK2Q92563 424 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 EPB41L4BQ9H329 900 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 CDC42EP4Q9H3Q1 356 aaKnown RBP22.73■■□□□ 1.23
ACTN4-210ENST00000588618 SEMA4AQ9H3S1 761 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 CD248Q9HCU0 757 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 CHMP2BQ9UQN3 213 aa22.73■■□□□ 1.23
ACTN4-210ENST00000588618 A0A0J9YYE9 177 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 TRBC1P01850 177 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 COPAP53621 1224 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 LAMB3Q13751 1172 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 TTC31Q49AM3 519 aaPredicted RBP22.72■■□□□ 1.23
ACTN4-210ENST00000588618 ERAP2Q6P179 960 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 TMEM92Q6UXU6 159 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 PARS2Q7L3T8 475 aaKnown RBP22.72■■□□□ 1.23
ACTN4-210ENST00000588618 RELL1Q8IUW5 271 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 FBXO36Q8NEA4 188 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 GANCQ8TET4 914 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 MKRN2Q9H000 416 aaKnown RBP22.72■■□□□ 1.23
ACTN4-210ENST00000588618 HACD3Q9P035 362 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 SPO11Q9Y5K1 396 aa22.72■■□□□ 1.23
ACTN4-210ENST00000588618 A0A0U1RQS6 177 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 TSPAN11A1L157 253 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 MAGEB16A2A368 324 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 UPK3BL1B0FP48 263 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 UPK3BL2E5RIL1 263 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 MID1O15344 667 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 ACADMP11310 421 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 NEK3P51956 506 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 SFSWAPQ12872 951 aaKnown RBP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 UAP1Q16222 522 aaPredicted RBP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 CCDC38Q502W7 563 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 PCID2Q5JVF3 399 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 GLT6D1Q7Z4J2 308 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 STAMBPL1Q96FJ0 436 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 SIPA1Q96FS4 1042 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 NAT9Q9BTE0 207 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 NINJ2Q9NZG7 142 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 SCML1Q9UN30 329 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 HEATR9A2RTY3 570 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 CAPN8A6NHC0 703 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 CRTAMO95727 393 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 ALPIP09923 528 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 CYP2A6P11509 494 aaPredicted RBP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 ABL2P42684 1182 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 RPS9P46781 194 aaKnown RBP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 RPS14P62263 151 aaKnown RBP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 FAM193AP78312 1265 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 ERN2Q76MJ5 926 aaKnown RBP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 CCNJLQ8IV13 435 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 PALM2Q8IXS6 379 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 BRSK1Q8TDC3 778 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 ARRDC3Q96B67 414 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 SCRN2Q96FV2 425 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 OMDQ99983 421 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 CHRDQ9H2X0 955 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 TRABDQ9H4I3 376 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 MAGEE1Q9HCI5 957 aa22.71■■□□□ 1.23
ACTN4-210ENST00000588618 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 BCCIPQ9P287 314 aaKnown RBP eCLIP22.71■■□□□ 1.23
ACTN4-210ENST00000588618 SCN8AQ9UQD0 1980 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 C2orf81A6NN90 581 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 ALDH1A2O94788 518 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 SLC4A1P02730 911 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 ADRA1DP25100 572 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 SUOXP51687 545 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 ZBTB16Q05516 673 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 KYNUQ16719 465 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 LRRC73Q5JTD7 316 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 KIAA1324Q6UXG2 1013 aaKnown RBP22.7■■□□□ 1.22
ACTN4-210ENST00000588618 PGBD3Q8N328 593 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 PTCD2Q8WV60 388 aaKnown RBP22.7■■□□□ 1.22
ACTN4-210ENST00000588618 CLDN23Q96B33 292 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 ZNF778Q96MU6 729 aa22.7■■□□□ 1.22
ACTN4-210ENST00000588618 EBNA1BP2Q99848 306 aaKnown RBP22.7■■□□□ 1.22
ACTN4-210ENST00000588618 ZC3H7BQ9UGR2 993 aaKnown RBP22.7■■□□□ 1.22
ACTN4-210ENST00000588618 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.7■■□□□ 1.22
ACTN4-210ENST00000588618 C1orf232A0A0U1RR37 186 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 NEMP1O14524 444 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 AURKAO14965 403 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 DCNP07585 359 aaKnown RBP22.69■■□□□ 1.22
ACTN4-210ENST00000588618 ADRB3P13945 408 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 TIMP2P16035 220 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 HNF1BP35680 557 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 PMS2P54278 862 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 PDE1BQ01064 536 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 GAS6Q14393 721 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 HDDC3Q8N4P3 179 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 TSTD1Q8NFU3 115 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 HMGB4Q8WW32 186 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 TTC25Q96NG3 672 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 HDAC8Q9BY41 377 aa22.69■■□□□ 1.22
ACTN4-210ENST00000588618 GPR63Q9BZJ6 419 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms