RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 FERMT1Q9BQL6 677 aa10.16□□□□□ -0.78
TPM4-207ENST00000588032 FZD3Q9NPG1 666 aa10.16□□□□□ -0.78
TPM4-207ENST00000588032 GPR27Q9NS67 375 aa10.16□□□□□ -0.78
TPM4-207ENST00000588032 DNPEPQ9ULA0 475 aa10.16□□□□□ -0.78
TPM4-207ENST00000588032 TTLL3Q9Y4R7 772 aa10.16□□□□□ -0.78
TPM4-207ENST00000588032 RAI2Q9Y5P3 530 aa10.16□□□□□ -0.78
TPM4-207ENST00000588032 SPTY2D1-AS1A0A0U1RR47 76 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 TTC24A2A3L6 582 aaPredicted RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 POM121BA6NF01 834 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 PSMD11O00231 422 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 RAD51BO15315 384 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 SH3BP5O60239 455 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 FZD6O60353 706 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 ITGAVP06756 1048 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 ELFN1P0C7U0 828 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 C6P13671 934 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 VIPR1P32241 457 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 EPHB1P54762 984 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 DSC2Q02487 901 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 RALGDSQ12967 914 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 ARHGEF7Q14155 803 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 PRKD1Q15139 912 aaPredicted RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 SLC14A2Q15849 920 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 PSAPL1Q6NUJ1 521 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 PTAR1Q7Z6K3 402 aaPredicted RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 RAVER1Q8IY67 606 aaKnown RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 CNTD1Q8N815 330 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 TP53I13Q8NBR0 393 aaPredicted RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 DEFB124Q8NES8 71 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 RHBDD1Q8TEB9 315 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 SETD7Q8WTS6 366 aaKnown RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 PIH1D2Q8WWB5 315 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 TEKT5Q96M29 485 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 MCCC1Q96RQ3 725 aaPredicted RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 HEMGNQ9BXL5 484 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 ADGRE3Q9BY15 652 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 OSBPL8Q9BZF1 889 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 SAE1Q9UBE0 346 aaPredicted RBP10.15□□□□□ -0.78
TPM4-207ENST00000588032 TRIM10Q9UDY6 481 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 GUCA1BQ9UMX6 200 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 CA5BQ9Y2D0 317 aa10.15□□□□□ -0.78
TPM4-207ENST00000588032 USP34Q70CQ2 3546 aa10.15□□□□□ -0.79
TPM4-207ENST00000588032 VPS13AQ96RL7 3174 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 GOLGA6L9A6NEM1 432 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 H3BM21 787 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 CBFA2T3O75081 653 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 RECQL5O94762 991 aaPredicted RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 HEXIM1O94992 359 aaKnown RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 PYGMP11217 842 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 ZNF30P17039 623 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 HTR1BP28222 390 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 EPHA8P29322 1005 aaPredicted RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 THOP1P52888 689 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 HNRNPKP61978 463 aaKnown RBP eCLIP10.14□□□□□ -0.79
TPM4-207ENST00000588032 ADCY2Q08462 1091 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 NIPAL4Q0D2K0 466 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 ZBTB17Q13105 803 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 MTM1Q13496 603 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 NOMO1Q15155 1222 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 LLGL1Q15334 1064 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 SHBQ15464 509 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 TRIP6Q15654 476 aaKnown RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 WSCD2Q2TBF2 565 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 PRAMEF14Q5SWL7 426 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 GLRX5Q86SX6 157 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 ZC3H18Q86VM9 953 aaKnown RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 PARGQ86W56 976 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 CBARPQ8N350 705 aaPredicted RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 ATL2Q8NHH9 583 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 SAP25Q8TEE9 199 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 HTR3CQ8WXA8 447 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 ALG3Q92685 438 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 HAUS1Q96CS2 278 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 IMP4Q96G21 291 aaKnown RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 HES6Q96HZ4 224 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 AGAP3Q96P47 875 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 SRPK1Q96SB4 655 aaKnown RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 TDRD1Q9BXT4 1180 aaKnown RBP10.14□□□□□ -0.79
TPM4-207ENST00000588032 SLC25A51Q9H1U9 297 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 PCDH9Q9HC56 1237 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 SEPT10Q9P0V9 454 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 B4GALT6Q9UBX8 382 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 TRHDEQ9UKU6 1024 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 PCOLCE2Q9UKZ9 415 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 CHKBQ9Y259 395 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 PLXNA2O75051 1894 aa10.14□□□□□ -0.79
TPM4-207ENST00000588032 ADAMTS9Q9P2N4 1935 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 TRPM6Q9BX84 2022 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 A0A0J9YYE9 177 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 A0A0U1RQJ8 604 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 NEMP2A6NFY4 417 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 ANKRD66B4E2M5 251 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 DDX3YO15523 660 aaKnown RBP10.13□□□□□ -0.79
TPM4-207ENST00000588032 FTCDO95954 541 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 PRLP01236 227 aa10.13□□□□□ -0.79
TPM4-207ENST00000588032 TRBC1P01850 177 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms