RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TBC1D3Q8IZP1 549 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 NOA1Q8NC60 698 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRN4CLQ8ND94 238 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 CPT1BQ92523 772 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 KLK6Q92876 244 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 SCRN2Q96FV2 425 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 PPP1R2P1Q96PQ5 205 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 MCCC1Q96RQ3 725 aaPredicted RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 TBL1YQ9BQ87 522 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 WRAP53Q9BUR4 548 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 CARD6Q9BX69 1037 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 FSD1LQ9BXM9 530 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 ADGRE3Q9BY15 652 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 EBF2Q9HAK2 575 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 PIH1D1Q9NWS0 290 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 RPL26L1Q9UNX3 145 aaKnown RBP10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 COQ6Q9Y2Z9 468 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 PCDHGA2Q9Y5H1 932 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 SPO11Q9Y5K1 396 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 THADAQ6YHU6 1953 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRK1Q38SD2 2015 aa10.75□□□□□ -0.69
SMARCA4-213ENST00000587988 A0A1W2PQU0 124 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CTAGE15A4D2H0 777 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 GOLGA6CA6NDK9 693 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 GOLGA6BA6NDN3 693 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 IGLON5A6NGN9 336 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CAPN8A6NHC0 703 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRC72A6NJI9 287 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 GOLGA8CPA6NN73 597 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 ERI2A8K979 691 aaKnown RBP10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 E7EVH7 732 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 AURKAO14965 403 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 PSMD3O43242 534 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 MAP3K13O43283 966 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 TSPAN6O43657 245 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 MMP20O60882 483 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 SUN1O94901 812 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 IGHV4-34P06331 123 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 APRTP07741 180 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 GOLGA6DP0CG33 693 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CTAGE8P0CG41 777 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CYP2A6P11509 494 aaPredicted RBP10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 TPH1P17752 444 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 GM2AP17900 193 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 HLA-DPA1P20036 260 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 MAT2AP31153 395 aaKnown RBP10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 VIPR1P32241 457 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CNR2P34972 360 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 ADCY8P40145 1251 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 LMAN1P49257 510 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 SUOXP51687 545 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 ELP6Q0PNE2 266 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 MSLNQ13421 630 aaPredicted RBP10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 FGL2Q14314 439 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 KCNJ11Q14654 390 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CNGA3Q16281 694 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 PLK5Q496M5 336 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 PMS2CLQ68D20 193 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 KIAA0895LQ68EN5 471 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 ERAP2Q6P179 960 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CRTC1Q6UUV9 634 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 LIPIQ6XZB0 460 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 SLC36A4Q6YBV0 504 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 SYDE1Q6ZW31 735 aaPredicted RBP10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 USP45Q70EL2 814 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 DPPA4Q7L190 304 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CTAGE6Q86UF2 777 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 CTAGE4Q8IX94 777 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 OR52K1Q8NGK4 314 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 BIRC7Q96CA5 298 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 EID2BQ96D98 161 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 PRRX2Q99811 253 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 HINFPQ9BQA5 517 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 TRIM31Q9BZY9 425 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 DUSP15Q9H1R2 295 aaPredicted RBP10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 KDM4CQ9H3R0 1056 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRC40Q9H9A6 602 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 L2HGDHQ9H9P8 463 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 ARNT2Q9HBZ2 717 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 PREBQ9HCU5 417 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 GOLGA6AQ9NYA3 693 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 ASIC3Q9UHC3 531 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 SHOC2Q9UQ13 582 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 TRPM6Q9BX84 2022 aa10.74□□□□□ -0.69
SMARCA4-213ENST00000587988 FAM187AA6NFU0 413 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 METTL12A8MUP2 240 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 DNALI1O14645 258 aaPredicted RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 TMEM63AO94886 807 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 HEXIM1O94992 359 aaKnown RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 FSBPO95073 299 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 CLDN7O95471 211 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 FGF1P05230 155 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 C1SP09871 688 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 TPSB2P20231 275 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 MAOBP27338 520 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 PTGER3P43115 390 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 MAGEA6P43360 314 aa10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 TNNT3P45378 269 aaPredicted RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 RPL21P46778 160 aaKnown RBP10.73□□□□□ -0.69
SMARCA4-213ENST00000587988 LIG3P49916 1009 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms