RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 RGS21Q2M5E4 152 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 TTC39BQ5VTQ0 682 aaPredicted RBP9.71□□□□□ -0.85
LINC01539-201ENST00000587904 SDHAF4Q5VUM1 108 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 TUBA3EQ6PEY2 450 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 DEFB128Q7Z7B8 93 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 ARHGAP12Q8IWW6 846 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 TTC30BQ8N4P2 665 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 FBXO22Q8NEZ5 403 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 HCAR2Q8TDS4 363 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 DENND1AQ8TEH3 1009 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 TTC17Q96AE7 1141 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 IGSF21Q96ID5 467 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 B3GALT6Q96L58 329 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 LRRC40Q9H9A6 602 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 MOV10Q9HCE1 1003 aaKnown RBP9.71□□□□□ -0.85
LINC01539-201ENST00000587904 PHTF1Q9UMS5 762 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 CDY1Q9Y6F8 540 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 GREB1Q4ZG55 1949 aa9.71□□□□□ -0.85
LINC01539-201ENST00000587904 COL4A6Q14031 1691 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 IGLV3-10A0A075B6K4 115 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 ARHGAP42A6NI28 874 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 SYCE1LA8MT33 242 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 SLC22A1O15245 554 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 CACNG3O60359 315 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 EDF1O60869 148 aaKnown RBP9.71□□□□□ -0.86
LINC01539-201ENST00000587904 SULT1C4O75897 302 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 ALDH1A2O94788 518 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 VNN2O95498 520 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 IGLV3-27P01718 113 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 MT-ND3P03897 115 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 CLTBP09497 229 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 RHOQP17081 205 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 CA4P22748 312 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 NDST2P52849 883 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 ACTR3P61158 418 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 CHRNEQ04844 493 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 EFEMP1Q12805 493 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 MPP2Q14168 576 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 ANO4Q32M45 955 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 FAM91A1Q658Y4 838 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 TPGS2Q68CL5 300 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 KCTD11Q693B1 232 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 RSPO2Q6UXX9 243 aaPredicted RBP9.71□□□□□ -0.86
LINC01539-201ENST00000587904 LINC00523Q86TU6 105 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 TMEM173Q86WV6 379 aaPredicted RBP9.71□□□□□ -0.86
LINC01539-201ENST00000587904 TP53INP2Q8IXH6 220 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 TTC9BQ8N6N2 239 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 PPP4R1Q8TF05 950 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 BCL7CQ8WUZ0 217 aaPredicted RBP9.71□□□□□ -0.86
LINC01539-201ENST00000587904 CDKL2Q92772 493 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 PLEKHA8Q96JA3 519 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 MRPL1Q9BYD6 325 aaKnown RBP9.71□□□□□ -0.86
LINC01539-201ENST00000587904 SHCBP1LQ9BZQ2 653 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 CWH43Q9H720 699 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 MAN1C1Q9NR34 630 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 THAP1Q9NVV9 213 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 MARCH2Q9P0N8 246 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 AFF4Q9UHB7 1163 aaKnown RBP9.71□□□□□ -0.86
LINC01539-201ENST00000587904 AAR2Q9Y312 384 aaKnown RBP9.71□□□□□ -0.86
LINC01539-201ENST00000587904 PCDHGA11Q9Y5H2 935 aa9.71□□□□□ -0.86
LINC01539-201ENST00000587904 WDR27A2RRH5 827 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 SLC38A8A6NNN8 435 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 NT5C1B-RDH14C9J2C7 533 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ZNF701M0R085 212 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MATN3O15232 486 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ZBTB24O43167 697 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 DNAJC6O75061 913 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MOCS2O96007 188 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 SOD2P04179 222 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 SNRPAP09012 282 aaKnown RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TCEA1P23193 301 aaKnown RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 FOXN2P32314 431 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 C21orf59P57076 290 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 DUSP4Q13115 394 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 SPANXN3Q5MJ09 141 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 C10orf120Q5SQS8 335 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ARTNQ5T4W7 220 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PIK3R6Q5UE93 754 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 NAPEPLDQ6IQ20 393 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 DHDDSQ86SQ9 333 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CTAGE3PQ8IX95 158 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ZNF683Q8IZ20 524 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 UMODL1-AS1Q8N2C9 162 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PPM1NQ8N819 430 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 NETO2Q8NC67 525 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TOP1MTQ969P6 601 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CELF6Q96J87 481 aaKnown RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ZNF558Q96NG5 402 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TTC1Q99614 292 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 IL12RB2Q99665 862 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 AIFM2Q9BRQ8 373 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 HERC2P3Q9BVR0 1158 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CEP41Q9BYV8 373 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ZYG11BQ9C0D3 744 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 GRIP2Q9C0E4 1043 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PLAC1Q9HBJ0 212 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CASS4Q9NQ75 786 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms