RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 GM2AP17900 193 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ACP1P24666 158 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MAN1A1P33908 653 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 HSPA9P38646 679 aaKnown RBP20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 GARSP41250 739 aaKnown RBP20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CAMK2BQ13554 666 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 IHHQ14623 411 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ACOX1Q15067 660 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 DENND2CQ68D51 928 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 SARM1Q6SZW1 724 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RD3Q7Z3Z2 195 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TMPRSS12Q86WS5 348 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PHACTR4Q8IZ21 702 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TEX26Q8N6G2 289 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TC2NQ8N9U0 490 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 SEMA3CQ99985 751 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MGME1Q9BQP7 344 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ZNF670Q9BS34 389 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 NLGN3Q9NZ94 848 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TFR2Q9UP52 801 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MYLKQ15746 1914 aa20.13■□□□□ 0.81
TRAPPC6A-203ENST00000587818 LY6G6EA0A0G2JKS1 128 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 SRRM3A6NNA2 597 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CPP00450 1065 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ELFN1P0C7U0 828 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ALPPL2P10696 532 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CTPS1P17812 591 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TARDBPQ13148 414 aaKnown RBP eCLIP20.12■□□□□ 0.816e-8■■■■□ 25.8
TRAPPC6A-203ENST00000587818 PRRT3Q5FWE3 981 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 HES3Q5TGS1 186 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 HID1Q8IV36 788 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PELI3Q8N2H9 469 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RNF25Q96BH1 459 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 FAF2Q96CS3 445 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RNF157Q96PX1 679 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CLPBQ9H078 707 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RBM22Q9NW64 420 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 SPASTQ9UBP0 616 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 APOBEC3BQ9UH17 382 aaKnown RBP20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 U3KQA8 63 aa20.12■□□□□ 0.81
TRAPPC6A-203ENST00000587818 LRRD1A4D1F6 860 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MATN3O15232 486 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CELA2BP08218 269 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PDHA1P08559 390 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CKMT1AP12532 417 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ARHGAP25P42331 645 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MAGEA1P43355 309 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 DSC2Q02487 901 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PPARDQ03181 441 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CYP4F3Q08477 520 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 IFI16Q16666 785 aaKnown RBP20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 KCTD16Q68DU8 428 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MACC1Q6ZN28 852 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 LRRC49Q8IUZ0 686 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CCNYQ8ND76 341 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 BTN2A2Q8WVV5 523 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 FUBP1Q96AE4 644 aaKnown RBP20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 SLC13A1Q9BZW2 595 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CCDC86Q9H6F5 360 aaKnown RBP20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 LCMT1Q9UIC8 334 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PHTF1Q9UMS5 762 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RAI2Q9Y5P3 530 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CSNK1G3Q9Y6M4 447 aa20.11■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CPED1A4D0V7 1026 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CFAP69A5D8W1 941 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 YY2O15391 372 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 SOCS5O75159 536 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MTA2O94776 668 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PGLSO95336 258 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ALPIP09923 528 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TSHRP16473 764 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CCNCP24863 283 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 PEX5P50542 639 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 INSM1Q01101 510 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ILKQ13418 452 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 AGERQ15109 404 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ALG11Q2TAA5 492 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ARMC12Q5T9G4 340 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 NPNTQ6UXI9 565 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 B4GALNT4Q76KP1 1039 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RHOT2Q8IXI1 618 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 RFFLQ8WZ73 363 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 MAML1Q92585 1016 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TSGA13Q96PP4 275 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 IL12RB2Q99665 862 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 LRRC61Q9BV99 259 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TTLL3Q9Y4R7 772 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 HEY1Q9Y5J3 304 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ASXL3Q9C0F0 2248 aa20.1■□□□□ 0.81
TRAPPC6A-203ENST00000587818 C3orf70A6NLC5 250 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 TOR1BO14657 336 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 JCHAINP01591 159 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CDK4P11802 303 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 CCNB1P14635 433 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 VIPR1P32241 457 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 NOP2P46087 812 aaKnown RBP20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 ZNF75DP51815 510 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 NIPAL4Q0D2K0 466 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 NFATC4Q14934 902 aa20.09■□□□□ 0.81
TRAPPC6A-203ENST00000587818 LLGL1Q15334 1064 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms