RNA–Protein interactions for RNA: ENST00000587215.1

PKN1-209, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 363 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-209ENST00000587215 RPIAP49247 311 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 RENBPP51606 427 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 SRP54P61011 504 aaKnown RBP16.66■□□□□ 0.26
PKN1-209ENST00000587215 POLR2LP62875 67 aaKnown RBP16.66■□□□□ 0.26
PKN1-209ENST00000587215 PIGHQ14442 188 aaPredicted RBP16.66■□□□□ 0.26
PKN1-209ENST00000587215 ELOCQ15369 112 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 PGBD5Q8N414 524 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 FSTL5Q8N475 847 aaPredicted RBP16.66■□□□□ 0.26
PKN1-209ENST00000587215 TPCN2Q8NHX9 752 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 CPLX3Q8WVH0 158 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 GLMNQ92990 594 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 FUBP1Q96AE4 644 aaKnown RBP16.66■□□□□ 0.26
PKN1-209ENST00000587215 CSPG4P5Q96PW8 444 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 THAP2Q9H0W7 228 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 SEPT3Q9UH03 358 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 PADI4Q9UM07 663 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 ASXL3Q9C0F0 2248 aa16.66■□□□□ 0.26
PKN1-209ENST00000587215 A0A087X0T9 212 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 TMEM202A6NGA9 273 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 MAFKO60675 156 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 DXOO77932 396 aaKnown RBP16.65■□□□□ 0.26
PKN1-209ENST00000587215 RASGRP1O95267 797 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 SERPING1P05155 500 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 CYP1A2P05177 515 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 FAM228BP0C875 321 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 CTSEP14091 401 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 IL4RP24394 825 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 HTR1BP28222 390 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 ARL4AP40617 200 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 UBASH3AP57075 661 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 AP1S1P61966 158 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 GABREP78334 506 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 MTM1Q13496 603 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 TCEA2Q15560 299 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 TDRD12Q587J7 1177 aaKnown RBP16.65■□□□□ 0.26
PKN1-209ENST00000587215 TMCO4Q5TGY1 634 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 ESRP1Q6NXG1 681 aaKnown RBP16.65■□□□□ 0.26
PKN1-209ENST00000587215 LVRNQ6Q4G3 990 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 DPPA4Q7L190 304 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 LSMEM2Q8N112 164 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 NIPA2Q8N8Q9 360 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 SPOCK2Q92563 424 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 HIC2Q96JB3 615 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 WDR92Q96MX6 357 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 ZNF578Q96N58 590 aaPredicted RBP16.65■□□□□ 0.26
PKN1-209ENST00000587215 CCDC3Q9BQI4 270 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 POLR1BQ9H9Y6 1135 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 PCDH18Q9HCL0 1135 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.65■□□□□ 0.26
PKN1-209ENST00000587215 GULP1Q9UBP9 304 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 PCDHGC4Q9Y5F7 938 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 ENTPD2Q9Y5L3 495 aa16.65■□□□□ 0.26
PKN1-209ENST00000587215 COL27A1Q8IZC6 1860 aaPredicted RBP16.65■□□□□ 0.26
PKN1-209ENST00000587215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.64■□□□□ 0.25
PKN1-209ENST00000587215 HTRA2O43464 458 aaPredicted RBP16.64■□□□□ 0.25
PKN1-209ENST00000587215 TNFP01375 233 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 HOXC4P09017 264 aaPredicted RBP16.64■□□□□ 0.25
PKN1-209ENST00000587215 ALPIP09923 528 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 TRIM23P36406 574 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 ZBED6P86452 979 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 SLC25A11Q02978 314 aaKnown RBP16.64■□□□□ 0.25
PKN1-209ENST00000587215 CCDC173Q0VFZ6 552 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 PELI3Q8N2H9 469 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 CBARPQ8N350 705 aaPredicted RBP16.64■□□□□ 0.25
PKN1-209ENST00000587215 SDR16C5Q8N3Y7 309 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 TEKT4Q8WW24 435 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 NAT6Q93015 286 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 GRAMD1AQ96CP6 724 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 ATXN7L3BQ96GX2 97 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 PRR11Q96HE9 360 aaPredicted RBP16.64■□□□□ 0.25
PKN1-209ENST00000587215 NUDCD1Q96RS6 583 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 RBM15Q96T37 977 aaKnown RBP eCLIP16.64■□□□□ 0.25
PKN1-209ENST00000587215 NUP85Q9BW27 656 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 NOD2Q9HC29 1040 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 B4GALT6Q9UBX8 382 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 KLQ9UEF7 1012 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 IP6K2Q9UHH9 426 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 DGKBQ9Y6T7 804 aa16.64■□□□□ 0.25
PKN1-209ENST00000587215 IGSF10Q6WRI0 2623 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 TCEA3O75764 348 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 ELFN1P0C7U0 828 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 TLE3Q04726 772 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 RBM44Q6ZP01 1051 aaKnown RBP16.63■□□□□ 0.25
PKN1-209ENST00000587215 GKN2Q86XP6 184 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 SPACA3Q8IXA5 215 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 ARL10Q8N8L6 244 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 ATL2Q8NHH9 583 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 PCDH19Q8TAB3 1148 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 FAM71BQ8TC56 605 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 SCG3Q8WXD2 468 aaKnown RBP16.63■□□□□ 0.25
PKN1-209ENST00000587215 OR1E3Q8WZA6 343 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 COQ10AQ96MF6 247 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 LGR4Q9BXB1 951 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 ASCL3Q9NQ33 180 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 MRPL40Q9NQ50 206 aaKnown RBP16.63■□□□□ 0.25
PKN1-209ENST00000587215 SIRPGQ9P1W8 387 aa16.63■□□□□ 0.25
PKN1-209ENST00000587215 RABGEF1Q9UJ41 708 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms