RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 HTR1BP28222 390 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 UCNP55089 124 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 SRP54P61011 504 aaKnown RBP14.09□□□□□ -0.15
ATG4D-206ENST00000586863 MTM1Q13496 603 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 AGERQ15109 404 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 E4F1Q66K89 784 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-206ENST00000586863 PLEKHA7Q6IQ23 1121 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 RFX8Q6ZV50 586 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 B3GNT8Q7Z7M8 397 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 ZNF843Q8N446 348 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 WDR36Q8NI36 951 aaKnown RBP14.09□□□□□ -0.15
ATG4D-206ENST00000586863 WDR48Q8TAF3 677 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 ECHDC3Q96DC8 303 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 NSMCE3Q96MG7 304 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 WDR92Q96MX6 357 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 CINPQ9BW66 212 aaPredicted RBP14.09□□□□□ -0.15
ATG4D-206ENST00000586863 DPH1Q9BZG8 443 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 ATP13A3Q9H7F0 1226 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 SP110Q9HB58 689 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 PARVAQ9NVD7 372 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 DONSONQ9NYP3 566 aa14.09□□□□□ -0.15
ATG4D-206ENST00000586863 CCDC187A0A096LP49 1063 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 LRRC53A6NM62 1247 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 ERVH48-1M5A8F1 160 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 DFFAO00273 331 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 RECQL5O94762 991 aaPredicted RBP14.08□□□□□ -0.16
ATG4D-206ENST00000586863 TNFSF15O95150 251 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 GM2AP17900 193 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 ERCC2P18074 760 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 SERPINA4P29622 427 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 MIPP30301 263 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 CSNK1DP48730 415 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 PPP6R3Q5H9R7 873 aaPredicted RBP14.08□□□□□ -0.16
ATG4D-206ENST00000586863 CCDC183Q5T5S1 534 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 ERMARDQ5T6L9 678 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 LVRNQ6Q4G3 990 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 TP53INP2Q8IXH6 220 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 SDR16C5Q8N3Y7 309 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 SCG3Q8WXD2 468 aaKnown RBP14.08□□□□□ -0.16
ATG4D-206ENST00000586863 OR1E3Q8WZA6 343 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 FUBP1Q96AE4 644 aaKnown RBP14.08□□□□□ -0.16
ATG4D-206ENST00000586863 RBM15Q96T37 977 aaKnown RBP eCLIP14.08□□□□□ -0.16
ATG4D-206ENST00000586863 FGF22Q9HCT0 170 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 MYO6Q9UM54 1294 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 GPR34Q9UPC5 381 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
ATG4D-206ENST00000586863 A0A1W2PQM1 296 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 TMEM202A6NGA9 273 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 TMEM191CA6NGB0 347 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 EIF3CLB5ME19 914 aaKnown RBP14.07□□□□□ -0.16
ATG4D-206ENST00000586863 D6RAR5 112 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 DAPK3O43293 454 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 ZIC2O95409 532 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-206ENST00000586863 KIAA1024LP59773 190 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 CCL7P80098 99 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 TYRO3Q06418 890 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 TAF1BQ53T94 588 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-206ENST00000586863 LIPIQ6XZB0 460 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 ZNF571Q7Z3V5 609 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-206ENST00000586863 CLEC14AQ86T13 490 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 GKN2Q86XP6 184 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 SFTPA2Q8IWL1 248 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 PELI3Q8N2H9 469 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 ARL14Q8N4G2 192 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 ATL2Q8NHH9 583 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 LIN37Q96GY3 246 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-206ENST00000586863 EIF3CQ99613 913 aaKnown RBP14.07□□□□□ -0.16
ATG4D-206ENST00000586863 FOXP3Q9BZS1 431 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 HAUS4Q9H6D7 363 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 MRPL40Q9NQ50 206 aaKnown RBP14.07□□□□□ -0.16
ATG4D-206ENST00000586863 DGKBQ9Y6T7 804 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 MYO18BQ8IUG5 2567 aa14.07□□□□□ -0.16
ATG4D-206ENST00000586863 TTC24A2A3L6 582 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-206ENST00000586863 CFAP69A5D8W1 941 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 A8MX80 341 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 TRAFD1O14545 582 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-206ENST00000586863 PRPSAP2O60256 369 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 LRCH4O75427 683 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 TNFP01375 233 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 RPLP0P05388 317 aaKnown RBP14.06□□□□□ -0.16
ATG4D-206ENST00000586863 ITGA2BP08514 1039 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 ELFN1P0C7U0 828 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 MLLT3P42568 568 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-206ENST00000586863 RHDQ02161 417 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 CFHR1Q03591 330 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 BCL2L1Q07817 233 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 IL10RBQ08334 325 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 VAC14Q08AM6 782 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 CLN3Q13286 438 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 DPYSQ14117 519 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 RFTN1Q14699 578 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-206ENST00000586863 ASIC2Q16515 512 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 PPP1R2P3Q6NXS1 205 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 DPPA4Q7L190 304 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 GPR156Q8NFN8 814 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 FNIP1Q8TF40 1166 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 SNRNP27Q8WVK2 155 aaKnown RBP14.06□□□□□ -0.16
ATG4D-206ENST00000586863 GFM1Q96RP9 751 aaKnown RBP14.06□□□□□ -0.16
ATG4D-206ENST00000586863 SEMA4CQ9C0C4 833 aa14.06□□□□□ -0.16
ATG4D-206ENST00000586863 EPB41L5Q9HCM4 733 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms